LOCUS BC016758 2029 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hematopoietic cell-specific Lyn substrate 1, mRNA
(cDNA clone MGC:1442 IMAGE:2966303), complete cds.
ACCESSION BC016758
VERSION BC016758.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2029)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2029)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC016758.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059786.
FEATURES Location/Qualifiers
source 1..2029
/db_xref="H-InvDB:HIT000037673"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1442 IMAGE:2966303"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2029
/gene="HCLS1"
/gene_synonym="HS1"
/db_xref="GeneID:3059"
/db_xref="HGNC:HGNC:4844"
/db_xref="MIM:601306"
CDS 50..1510
/gene="HCLS1"
/gene_synonym="HS1"
/codon_start=1
/product="hematopoietic cell-specific Lyn substrate 1"
/protein_id="AAH16758.1"
/db_xref="GeneID:3059"
/db_xref="HGNC:HGNC:4844"
/db_xref="MIM:601306"
/translation="MWKSVVGHDVSVSVETQGDDWDTDPDFVNDISEKEQRWGAKTIE
GSGRTEHINIHQLRNKVSEEHDVLRKKEMESGPKASHGYGGRFGVERDRMDKSAVGHE
YVAEVEKHSSQTDAAKGFGGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGR
YGVEKDKWDKAALGYDYKGETEKHESQRDYAKGFGGQYGIQKDRVDKSAVGFNEMEAP
TTAYKKTTPIEAASSGARGLKAKFESMAEEKRKREEEEKAQQVARRQQERKAVTKRSP
EAPQPVIAMEEPAVPAPLPKKISSEAWPPVGTPPSSESEPVRTSREHPVPLLPIRQTL
PEDNEEPPALPPRTLEGLQVEEEPVYEAEPEPEPEPEPEPENDYEDVEEMDRHEQEDE
PEGDYEEVLEPEDSSFSSALAGSSGCPAGAGAGAVALGISAVALYDYQGEGSDELSFD
PDDVITDIEMVDEGWWRGRCHGHFGLFPANYVKLLE"
BASE COUNT 557 a 460 c 595 g 417 t
ORIGIN
1 gtggacgcga ggagccgggc gcttagaaca gaggcttgca caggtggaga tgtggaagtc
61 tgtagtgggc catgatgtgt ctgtttccgt ggagacccag ggtgatgatt gggacacaga
121 tcctgacttt gtgaatgaca tctctgaaaa ggagcaacga tggggagcca agaccatcga
181 ggggtctgga cgcacagaac acatcaacat ccaccagctg aggaacaaag tatcagagga
241 gcatgatgtt ctcaggaaga aagagatgga gtcagggccc aaagcatccc atggctatgg
301 aggtcggttt ggagtagaaa gagaccgaat ggacaagagt gcagtgggcc atgagtatgt
361 tgccgaggtg gagaagcact cttctcagac ggatgctgcc aaaggctttg ggggcaagta
421 cggagttgag agggacaggg cagacaagtc agcagtcggc tttgattata aaggagaagt
481 ggagaagcat acatctcaga aagattactc tcgtggcttt ggtggccggt acggggtgga
541 gaaggataaa tgggacaaag cagctctggg atatgactac aagggagaga cggagaaaca
601 cgagtcccag agagattatg ccaagggctt tggtggccag tatggaatcc agaaggaccg
661 agtggataag agcgctgtcg gcttcaatga aatggaggcc ccgaccacag cttataagaa
721 gacgacgccc atagaagccg cttctagtgg tgcccgtggg ctgaaggcga aatttgagtc
781 catggctgag gagaagagga agcgagagga agaggagaag gcacagcagg tggccaggag
841 gcaacaggag cgaaaggctg tgacaaagag gagccctgag gctccacagc cagtgatagc
901 tatggaagag ccagcagtac cggccccact gcccaagaaa atctcctcag aggcctggcc
961 tccagttggg actcctccat catcagagtc tgagcctgtg agaaccagca gggaacaccc
1021 agtgcccttg ctgcccatta ggcagactct cccggaggac aatgaggagc ccccagctct
1081 gccccctagg actctggaag gcctccaggt ggaggaagag ccagtgtacg aagcagagcc
1141 tgagcctgag cccgagcctg agcccgagcc tgagaatgac tatgaggacg ttgaggagat
1201 ggacaggcat gagcaggagg atgaaccaga gggggactat gaggaggtgc tcgagcctga
1261 agattcttct ttttcttctg ctctggctgg atcatcaggc tgcccggctg gggctggggc
1321 tggggctgtg gctctgggga tctcagctgt ggctctatat gattaccaag gagagggaag
1381 tgatgagctt tcctttgatc cggacgacgt aatcactgac attgagatgg tggacgaggg
1441 ctggtggcgg ggacgttgcc atggccactt tggactcttc cctgcaaatt atgtcaagct
1501 tctggagtga ctagagctca ctgtctactg caactgtgat ttcccatgtc caaagtggct
1561 ctgcctccac cccctcccta ttcctgatgc aaatgtctaa ccagatgagt ttctggacag
1621 acttccctct cctgcttcat taagggcttg gggcagagac agcatgggga aggaggtccc
1681 cttccccaag agtcctctct atcctggatg agctcatgaa catttctctt gtgttcctga
1741 ctccttccca atgaacacct ctctgccacc ccaagctctg ctctcctcct ctgtgagctc
1801 tgggcttccc agtttgttta cccgggaaag tacgtctaga ttgtgtggtt tgcctcattg
1861 tgctatttgc ccactttcct tccctgaaga aatatctgtg aaccttcttt ctgttcagtc
1921 ctaaaattcg aaataaagtg agactatggt tcacctgtaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//