LOCUS BC016736 2407 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA
clone MGC:24536 IMAGE:4104978), complete cds.
ACCESSION BC016736
VERSION BC016736.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2407)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2407)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: d Column: 22.
FEATURES Location/Qualifiers
source 1..2407
/db_xref="H-InvDB:HIT000037659"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24536 IMAGE:4104978"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2407
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/db_xref="GeneID:3185"
/db_xref="MIM:601037"
CDS 354..1601
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/codon_start=1
/product="HNRPF protein"
/protein_id="AAH16736.1"
/db_xref="GeneID:3185"
/db_xref="MIM:601037"
/translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH
FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFRSHRTEMDWVLKHSGP
NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA
SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR
YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY
GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE
FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL
ESQSVSGCYGAGYSGQNSMGGYD"
misc_feature 690..902
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
misc_feature 1221..1430
/gene="HNRPF"
/gene_synonym="HNRNPF"
/gene_synonym="mcs94-1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 650 a 514 c 611 g 632 t
ORIGIN
1 ggggcggttc ccgtagcctt agctctcggc cctgggccct ttttcctcct cggctgcgcc
61 gcgtgtcctc ggagcgcggt ccctgtattg gtctcctgct cctagaggtt gagaacaaaa
121 acatgcacct ggagtttccc cggagccctc tgcgtggttg agcttcggtg gaatttcggg
181 gctcttggct gccagccgcg cttgcctggt agcaacagaa accagtcctg ctcgcctccg
241 tggacatttc attaccatcc agaagtgtct cccactgaag gcatccgtgg ttgtttttaa
301 gccacaaaaa agccacaccc aagatcacct gacacccacc ctgtcaagtg tccatgatgc
361 tgggccctga gggaggtgaa ggctttgtgg tcaagctccg tggcctgccc tggtcctgct
421 ctgttgagga cgtgcagaac ttcctctctg actgcacgat tcatgatggg gccgcaggtg
481 tccatttcat ctacactaga gagggcaggc agagtggtga ggcttttgtt gaacttggat
541 cagaagatga tgtaaaaatg gccctgaaaa aagacaggga aagcatggga caccggtaca
601 ttgaggtgtt caggtcccac agaaccgaga tggattgggt gttgaagcac agtggtccca
661 acagtgccga cagcgccaac gatggcttcg tgcggcttcg aggactccca tttggatgca
721 caaaggaaga aattgttcag ttcttctcag ggttggaaat tgtgccaaac gggatcacat
781 tgcctgtgga ccccgaaggc aagattacag gggaagcgtt cgtgcagttt gcctcgcagg
841 agttagctga gaaggctcta gggaaacaca aggagaggat agggcacagg tacattgagg
901 tgtttaagag cagccaggag gaagttaggt catactcaga tccccctctg aagttcatgt
961 ccgtgcagcg gccagggccc tatgaccggc ccgggactgc caggaggtac attggcatcg
1021 tgaagcaggc aggcctggaa aggatgaggc ctggtgccta cagcacaggc tacgggggct
1081 acgaggagta cagtggcctc agtgatggct acggcttcac caccgacctg ttcgggagag
1141 acctcagcta ctgtctctcc ggaatgtatg accacagata cggcgacagt gagttcacag
1201 tgcagagcac cacaggccac tgtgtccaca tgaggggcct gccgtacaaa gcgaccgaga
1261 acgacattta caacttcttc tctcctctca accctgtgag agtccatatt gagattggcc
1321 cagatggaag agtgacgggt gaagcagatg ttgagtttgc tactcatgaa gaagctgtgg
1381 cagctatgtc caaagacagg gccaatatgc agcacagata tatagaactc ttcttgaatt
1441 caacaacagg ggccagcaat ggggcgtata gcagccaggt gatgcaaggc atgggggtgt
1501 ctgctgccca ggccacttac agtggcctgg agagccagtc agtgagtggc tgttacgggg
1561 ccggctacag tgggcagaac agcatgggtg gctatgacta gttttgttag gaacatttga
1621 gttacttcaa tcattttcac aggcagccaa caagcaatta agagcagtta taatagagga
1681 agctggggga cccattttgc accatgagtt tgtgaaaaat ctggattaaa aaattacctc
1741 ttcagtgttt tctcatgcaa aattttcttc tagcatgtga taatgagtaa actaaaacta
1801 ttttcagctt ttctcaatta acattttggt agtatacttc agagtgatgt tatctaagtt
1861 taagtagttt aagtatgtta aatgtggatc ttttacacca catcacagtg aacacactgg
1921 ggagacgtcc ttttttggaa aactcaaagg tgctagctcc ctgattcaaa gaaatatttc
1981 tcatgtttgt tcattctagt ttatattttc atttaaaatc ctttaggtta agtttaagct
2041 ttttaaaagt tagttttgag aattgagaca caatactaat actgtaggaa ttggtgaggc
2101 cttgacttaa aactttcttt gtactgtgat ttccttttgg gtgtattttg ctaagtgaaa
2161 cttgttaaat tttttgttaa ctaaattttt ttcttaaaat aaagactttt tcacaatgac
2221 tggcacagat tactcagcaa aagatagcaa aacgggtggt tgaagataat tcattttaat
2281 cgtaatgtat tttagtgtga atttaaaaat ttcatacatc aaatctatga tctcccttat
2341 attcttatga tgaggctaaa taaaagtcta ataaaaacga aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaa
//