LOCUS BC016677 2256 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens histone cluster 1, H2ag, mRNA (cDNA clone MGC:17204
IMAGE:4342191), complete cds.
ACCESSION BC016677
VERSION BC016677.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2256)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2256)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570130.
FEATURES Location/Qualifiers
source 1..2256
/db_xref="H-InvDB:HIT000037628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17204 IMAGE:4342191"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2256
/gene="HIST1H2AG"
/gene_synonym="H2A.1b"
/gene_synonym="H2A/p"
/gene_synonym="pH2A/f"
/db_xref="GeneID:8969"
/db_xref="HGNC:HGNC:4737"
CDS 20..412
/gene="HIST1H2AG"
/gene_synonym="H2A.1b"
/gene_synonym="H2A/p"
/gene_synonym="pH2A/f"
/codon_start=1
/product="histone cluster 1, H2ag"
/protein_id="AAH16677.1"
/db_xref="GeneID:8969"
/db_xref="HGNC:HGNC:4737"
/translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERV
GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT
IAQGGVLPNIQAVLLPKKTESHHKAKGK"
BASE COUNT 639 a 517 c 530 g 570 t
ORIGIN
1 gtagtgagtt gcgctcgcta tgtctggacg tggcaagcag ggaggcaaag cccgcgctaa
61 ggccaagact cgctcttcta gggccggtct ccagttcccc gtgggccgag tgcaccgcct
121 gctccgcaaa ggcaactatg ccgagcgggt cggggccggc gcgccggtgt atctggcagc
181 ggtgctggag tacctgaccg ccgagatcct ggaactggcg ggcaacgcgg cccgcgacaa
241 caagaagacc cgcatcatcc cgcgtcatct ccaactggcc atccgcaacg acgaggagct
301 caacaagctg ctgggcaaag tcaccatcgc acagggcggt gtcctgccca acattcaggc
361 cgtgctactg cccaaaaaga ctgagagcca ccacaaggcg aagggcaagt aactatctgt
421 actagtttgt ggcagctcaa gtaaaatcga gtccaaacca acggctcttt tcagggccac
481 ccacgtcttc tctaaaagaa cttaacattt attccatgtg aaagaaagtg agacatggac
541 aagactctag tcataaatta cccatctttt tgaaaacagt gtagcgaaca ccgcagattt
601 aaaagaaaaa ctagagggaa ggtggtccag attttaccac gcttaaaagt taagatgtga
661 acaaatctct taggccatta cttaatttta aacttaatca gtgtgtgtcc acagagcacc
721 agtggcttcg tgagttcttg aagcactttg gcccaaaaga gttatcgccc gggctagaat
781 ttagcagaca gctgttccac gcgggccagg gcggcatgaa gaagtcccgc cgctacgtgc
841 ccggcacagt ggccctgcgc gacgttcggc gctaccagaa ctccgagctg ctgatcagca
901 agctgccgct cctgcgagag ctcggcggtg acgccgctgc acgagagcga ggctgaagaa
961 ctttgtgaca caatagtcca cctccctgca aaggctctgt cagagactca catctttcct
1021 gatggatagc tgtgaagcat tctcttaccc accctactgc atgttgcaaa gtattccttt
1081 aaaatgaagt gagtaaaata ctgggatgac gttatctgga gcccaagaaa gatggctcat
1141 ttggaaaggc ctaatatccc aagttgctta cctagaagaa cttgacagga tagttaataa
1201 taaaccttaa aacccatgaa gaaatctgag gtaaagtgtt agcacacaga ctgttaaaat
1261 gtctgcctca cagataggag ggaaaatata tagaggatta taatatggtt caacaaatgt
1321 tgatgagtat tagaaatgta cattagaaat attagaaatg tttatgacta ttagaaaagt
1381 acagggtatt gggcgttcct gacacaaact gaggcctcct agcaagactg gcagttttct
1441 gtaaaggagg gttatttact acggtagtgc aaataacttt tggtgttgta gctaaataag
1501 gaatactcat gccaagattg cacaattgtg cctcctccct ctgttcactg aactctgatg
1561 taattttttt tttttttttg agacggagtc tcgctctgtc gcccaggctg gagtgcagtg
1621 gcgctatctc ggctcactgc aagctccgcc tcccgggttc acgccattct cctgcctcag
1681 cctcctgagt agctggggct acaggcgtct gccaccatgc ccagctactt ttttgtattt
1741 ttagtagata cggggtttca ccgtgttagc caggatggtc ttgatgtcct gacctcgtga
1801 tccaccggcc tcggcctccc aaagtgctgg gattaccggc gtaagccacc acgcccggcc
1861 cactctgaag taatcttaag aagacgttaa ctcatttttc ttgtgtattg tagacacttt
1921 tggctgtctg gtaacatgga aaatctcaga atgatgtttt aagtatataa aatgccaaac
1981 aaagttaaat tacagttatc aaagtatttt taaaacttca tagtgataaa tgagactata
2041 tagttatatt gttaatatag ttaacacatt acatgatttg gtgagcctaa ttgctgttac
2101 taattagagg agtaaaaatg tttcacgata actcagcaat tgtaatgaga aatgaaacat
2161 ctaatgtctt ttgggttaca aagtaacagg tactgagatt tgtggcctaa attcataata
2221 aagtgaaatg ttcaagttca aaaaaaaaaa aaaaaa
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