LOCUS BC016623 2212 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ets variant 4, mRNA (cDNA clone MGC:9090
IMAGE:3854349), complete cds.
ACCESSION BC016623
VERSION BC016623.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: b Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307882.
FEATURES Location/Qualifiers
source 1..2212
/db_xref="H-InvDB:HIT000037604"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9090 IMAGE:3854349"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2212
/gene="ETV4"
/gene_synonym="E1A-F"
/gene_synonym="E1AF"
/gene_synonym="PEA3"
/gene_synonym="PEAS3"
/db_xref="GeneID:2118"
/db_xref="HGNC:HGNC:3493"
/db_xref="MIM:600711"
CDS 71..1525
/gene="ETV4"
/gene_synonym="E1A-F"
/gene_synonym="E1AF"
/gene_synonym="PEA3"
/gene_synonym="PEAS3"
/codon_start=1
/product="ets variant 4"
/protein_id="AAH16623.1"
/db_xref="GeneID:2118"
/db_xref="HGNC:HGNC:3493"
/db_xref="MIM:600711"
/translation="MERRMKAGYLDQQVPYTFSSKSPGNGSLREALIGPLGKLMDPGS
LPPLDSEDLFQDLSHFQETWLAEAQVPDSDEQFVPDFHSENLAFHSPTTRIKKEPQSP
RTDPALSCSRKPPLPYHHGEQCLYSSAYDPPRQIAIKSPAPGALGQSPLQPFPRAEQR
NFLRSSGTSQPHPGHGYLGEHSSVFQQPLDICHSFTSQGGGREPLPAPYQHQLSEPCP
PYPQQSFKQEYHDPLYEQAGQPAVDQGGVNGHRYPGAGVVIKQEQTDFAYDSDVTGCA
SMYLHTEGFSGPSPGDGAMGYGYEKPLRPFPDDVCVVPEKFEGDIKQEGVGAFREGPP
YQRRGALQLWQFLVALLDDPTNAHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPAMNY
DKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPALKAEFDRPVSE
EDTVPLSHLDESPAYLPELAGPAQPFGPKGGYSY"
BASE COUNT 465 a 692 c 620 g 435 t
ORIGIN
1 gcccggctcc tgggagcagg tctcggcccc cgcttggggc cccggccgtg cggccggagg
61 gagcggccgg atggagcgga ggatgaaagc cggatacttg gaccagcaag tgccctacac
121 cttcagcagc aaatcgcccg gaaatgggag cttgcgcgaa gcgctgatcg gcccgctggg
181 gaagctcatg gacccgggct ccctgccgcc cctcgactct gaagatctct tccaggatct
241 aagtcacttc caggagacgt ggctcgctga agctcaggta ccagacagtg atgagcagtt
301 tgttcctgat ttccattcag aaaacctagc tttccacagc cccaccacca ggatcaagaa
361 ggagccccag agtccccgca cagacccggc cctgtcctgc agcaggaagc cgccactccc
421 ctaccaccat ggcgagcagt gcctttactc cagtgcctat gaccccccca gacaaatcgc
481 catcaagtcc cctgcccctg gtgcccttgg acagtcgccc ctacagccct ttccccgggc
541 agagcaacgg aatttcctga gatcctctgg cacctcccag ccccaccctg gccatgggta
601 cctcggggaa catagctccg tcttccagca gcccctggac atttgccact ccttcacatc
661 tcagggaggg ggccgggaac ccctcccagc cccctaccaa caccagctgt cggagccctg
721 cccaccctat ccccagcaga gctttaagca agaataccat gatcccctgt atgaacaggc
781 gggccagcca gccgtggacc agggtggggt caatgggcac aggtacccag gggcgggggt
841 ggtgatcaaa caggaacaga cggacttcgc ctacgactca gatgtcaccg ggtgcgcatc
901 aatgtacctc cacacagagg gcttctctgg gccctctcca ggtgacgggg ccatgggcta
961 tggctatgag aaacctctgc gaccattccc agatgatgtc tgcgttgtcc ctgagaaatt
1021 tgaaggagac atcaagcagg aaggggtcgg tgcatttcga gaggggccgc cctaccagcg
1081 ccggggtgcc ctgcagctgt ggcaatttct ggtggccttg ctggatgacc caacaaatgc
1141 ccatttcatt gcctggacgg gccggggaat ggagttcaag ctcattgagc ctgaggaggt
1201 cgccaggctc tggggcatcc agaagaaccg gccagccatg aattacgaca agctgagccg
1261 ctcgctccga tactattatg agaaaggcat catgcagaag gtggctggtg agcgttacgt
1321 gtacaagttt gtgtgtgagc ccgaggccct cttctctttg gccttcccgg acaatcagcg
1381 tccagctctc aaggctgagt ttgaccggcc tgtcagtgag gaggacacag tccctttgtc
1441 ccacttggat gagagccccg cctacctccc agagctggct ggccccgccc agccatttgg
1501 ccccaagggt ggctactctt actagccccc agcggctgtt ccccctgccg caggtgggtg
1561 ctgccctgtg tacatataaa tgaatctggt gttggggaaa ccttcatctg aaacccacag
1621 atgtctctgg ggcagatccc cactgtccta ccagttgccc tagcccagac tctgagctgc
1681 tcaccggagt cattgggaag gaaaagtgga gaaatggcaa gtctagagtc tcagaaactc
1741 ccctgggggt ttcacctggg ccctggagga attcagctca gcttcttcct aggtccaagc
1801 cccccacacc ttttccccaa ccacagagaa caagagtttg ttctgttctg ggggacagag
1861 aaggcgcttc ccaacttcat actggcagga gggtgaggag gttcactgag ctccccagat
1921 ctcccactgc ggggagacag aagcctggac tctgccccac gctgtggccc tggagggtac
1981 cggtttgtca gttcttggtg ctctgtgttc ccagaggcag gcggaggttg aagaaaggaa
2041 cctgggatga ggggtgctgg gtataagcag agagggatgg gttcctgctc caagggaccc
2101 tttgcctttc ttctgccctt tcctaggccc aggcctgggt ttgtacttcc acctccacca
2161 catctgccag accttaataa aggcccccac ttctcccaaa aaaaaaaaaa aa
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