LOCUS BC016615 1700 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens RAB37, member RAS oncogene family, mRNA (cDNA clone
MGC:21391 IMAGE:4520191), complete cds.
ACCESSION BC016615
VERSION BC016615.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54859684
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1700
/db_xref="H-InvDB:HIT000037599"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21391 IMAGE:4520191"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1700
/gene="RAB37"
/db_xref="GeneID:326624"
/db_xref="HGNC:HGNC:30268"
/db_xref="MIM:609956"
CDS 3..674
/gene="RAB37"
/codon_start=1
/product="RAB37 protein"
/protein_id="AAH16615.1"
/db_xref="GeneID:326624"
/db_xref="HGNC:HGNC:30268"
/db_xref="MIM:609956"
/translation="MTGTPGAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTC
FLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRD
AQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGET
LAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSS
CCSFM"
BASE COUNT 437 a 444 c 460 g 359 t
ORIGIN
1 acatgacggg cacgccaggc gccgttgcca cccgggatgg cgaggccccc gagcgctccc
61 cgccctgcag tccgagctac gacctcacgg gcaaggtgat gcttctggga gacacaggcg
121 tcggcaaaac atgtttcctg atccaattca aagacggggc cttcctgtcc ggaaccttca
181 tagccaccgt cggcatagac ttcaggaaca aggtggtgac tgtggatggc gtgagagtga
241 agctgcagat ctgggacacc gctgggcagg aacggttccg aagcgtcacc catgcttatt
301 acagagatgc tcaggccttg cttctgctgt atgacatcac caacaaatct tctttcgaca
361 acatcagggc ctggctcact gagattcatg agtatgccca gagggacgtg gtgatcatgc
421 tgctaggcaa caaggcggat atgagcagcg aaagagtgat ccgttccgaa gacggagaga
481 ccttggccag ggagtacggt gttcccttcc tggagaccag cgccaagact ggcatgaatg
541 tggagttagc ctttctggcc atcgccaagg aactgaaata ccgggccggg catcaggcgg
601 atgagcccag cttccagatc cgagactatg tagagtccca gaagaagcgc tccagctgct
661 gctccttcat gtgaatccca gggggcagag aggaggctct ggaggcacac aggatgcagc
721 cttccccctc ccaggcctgg cttattccaa gaggctggtc ttgaattcct gagctcaagc
781 aacctgccgg cctcggcctc ccaaagtact gggattacac gcagaaggca ccatgcccag
841 gctagatgtg tcttatccca atcctttggc aggcatgcag ctccacaggc gatttcttca
901 agcagctgaa gtgtttagcc ctcctgggtt aagagccaga taaggagaaa tccctttcct
961 aggtttggaa tgtgttgtga aaaaaaagag aaatccctgg ctcctggagc tggtgggaga
1021 caagattaag caaacctccc ctgacatgta tccctttgac cccaagctct gcctcctccc
1081 tgaccaccca tgccctttcc tttaacttct caaacagata ccagggccta aactgcttta
1141 cctcccctcc tactgagtca ggttaggtgg tgggaggtca cccatttccg agttaaacca
1201 atgcaatatg agtaaaacaa agtcatgtgg gtatgtctgg ggtagagaga ggggtagcaa
1261 gttcatgtgt cctccttggt cacatatctc ccaaagctcc gatccctgcc atgggaagtg
1321 gacaggaaac atgaggtcat gacctgcagg catctttact gcagctctgc cggcctggag
1381 ggggagaggg ggaggaagaa gtatgcgctg cacatttctg aggctactgc atttgctttc
1441 aaggcagaaa tcttgctctg agcagtcagc ggctccagtt tgggcccgat aaggaagttc
1501 tccgtggcct ccctcaggca gagcagggag gaggctgaca ttgccagtct cttctggggc
1561 ccaaggcagg ttgcaggaga tccaatccca tagacagctc tgggcctctt gcatttgagt
1621 ttttcagaat taaactgcag tattttggaa agcaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa
//