LOCUS BC016609 1588 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens cytidine monophosphate N-acetylneuraminic acid
synthetase, mRNA (cDNA clone MGC:5424 IMAGE:3448277), complete cds.
ACCESSION BC016609
VERSION BC016609.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1588)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1588)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22027483.
FEATURES Location/Qualifiers
source 1..1588
/db_xref="H-InvDB:HIT000037596"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5424 IMAGE:3448277"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1588
/gene="CMAS"
/db_xref="GeneID:55907"
/db_xref="MIM:603316"
CDS 80..871
/gene="CMAS"
/codon_start=1
/product="CMAS protein"
/protein_id="AAH16609.1"
/db_xref="GeneID:55907"
/db_xref="MIM:603316"
/translation="MDSVEKGAATSVSNPRGRPSRGRPPKLQRNSRGGQGRGVEKPPH
LAALILARGGSKGIPLKNIKHLAGVPLIGWVLRAALDSGAFQSVWVSTDHDEIENVAK
QFGAQVHRRSSEVSKDSSTSLDAIIEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEM
IREEGYDSVFSVVRRHQFRWSEIQKGVREVTEPLNLNPAKRPRRQDWDGELYENGSFY
FAKRHLIEMGYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR"
misc_feature 215..850
/gene="CMAS"
/note="CTP_transf_3; Region: Cytidylyltransferase. This
family consists of two main Cytidylyltransferase
activities: 1) 3-deoxy-manno-octulosonate
cytidylyltransferase, EC:2.7.7.38 catalysing the
reaction:- CTP + 3-deoxy-D-manno-octulosonate <=>
diphosphate + CMP-3-deoxy-D-manno-octulosonate, 2)
acylneuraminate cytidylyltransferase EC:2.7.7.43,
catalysing the reaction:- CTP + N-acylneuraminate <=>
diphosphate + CMP-N-acylneuraminate"
/db_xref="CDD:pfam02348"
BASE COUNT 462 a 287 c 415 g 424 t
ORIGIN
1 gatcgggcgg cgccgagctg aggtggtgag ggactagctc ccggatgtgg agaagctggg
61 gagaaggcgt gggaggaaga tggactcggt ggagaagggg gccgccacct ccgtctccaa
121 cccgcggggg cgaccgtccc ggggccggcc gccgaagctg cagcgcaact ctcgcggcgg
181 ccagggccga ggtgtggaga agcccccgca cctggcagcc ctaattctgg cccggggagg
241 cagcaaaggc atccccctga agaacattaa gcacctggcg ggggtcccgc tcattggctg
301 ggtcctgcgt gcggccctgg attcaggggc cttccagagt gtatgggttt cgacagacca
361 tgatgaaatt gagaatgtgg ccaaacaatt tggtgcacaa gttcatcgaa gaagttctga
421 agtttcaaaa gacagctcta cctcactaga tgccatcata gaatttctta attatcataa
481 tgaggttgac attgtaggaa atattcaagc tacttctcca tgtttacatc ctactgatct
541 tcaaaaagtt gcagaaatga ttcgagaaga aggatatgat tctgttttct ctgttgtgag
601 acgccatcag tttcgatgga gtgaaattca gaaaggagtt cgtgaagtga ccgaacctct
661 gaatttaaat ccagctaaac ggcctcgtcg acaagactgg gatggagaat tatatgaaaa
721 tggctcattt tattttgcta aaagacattt gatagagatg ggttacttgc agggtggaaa
781 aatggcatac tacgaaatgc gagctgaaca tagtgtggat atagatgtgg atattgattg
841 gcctattgca gagcaaagag tattaaggtg aggctaatct cagaaagggc ctgttcaaag
901 cagacgctgt cttctttaaa actggattgc aaaatggaag tcagtgtatc agacaagcta
961 gcagttgtag atgaatggag aaaagaaatg ggcctgtgct ggaaagaagt ggcatatctt
1021 ggaaatgaag tgtctgatga agagtgcttg aagagagtgg gcctaagtgg cgctcctgct
1081 gatgcctgtt ctactgccca gaaggctgtt ggatacattt gcaaatgtaa tggtggccgt
1141 ggtgccatcc gagaatttgc agagcacatt tgcctactaa tggaaaaggt taataattca
1201 tgccaaaaat agaaattagc gtaatattga gaaaaaaatg atacagcctt cttcagccag
1261 tttgctttta tttttgatta agtaaattcc atgttgtaat gttacagaga gtgtgatttg
1321 gtttgtgata tatatatatt gtgctctact tttctcttta cgcaagataa ttatttagag
1381 actgattaca gtctttctca gatttttagt aaatgcaagt aagaacatca tcaaagttca
1441 ctttgtattg taccctgtaa aactgtgtgt ttgtgtgctt tcaaagatgt tgggatttta
1501 tttatctggg gacagtgtgt atggtaagac atgcccttct attaataaaa ctacatttct
1561 caaaaaaaaa aaaaaaaaaa aaaaaaaa
//