LOCUS BC016283 3508 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1,
mRNA (cDNA clone MGC:9023 IMAGE:3909151), complete cds.
ACCESSION BC016283
VERSION BC016283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3508)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3508)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506558.
FEATURES Location/Qualifiers
source 1..3508
/db_xref="H-InvDB:HIT000037511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9023 IMAGE:3909151"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3508
/gene="ABCE1"
/gene_synonym="ABC38"
/gene_synonym="OABP"
/gene_synonym="RLI"
/db_xref="GeneID:6059"
/db_xref="HGNC:HGNC:69"
/db_xref="MIM:601213"
CDS 106..1905
/gene="ABCE1"
/gene_synonym="ABC38"
/gene_synonym="OABP"
/gene_synonym="RLI"
/codon_start=1
/product="ATP-binding cassette, sub-family E (OABP),
member 1"
/protein_id="AAH16283.1"
/db_xref="GeneID:6059"
/db_xref="HGNC:HGNC:69"
/db_xref="MIM:601213"
/translation="MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQ
SKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRP
GEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKIL
EDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLS
GGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDL
SVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVA
ETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRML
AGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQ
IENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFI
LHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITF
RRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD"
BASE COUNT 1159 a 593 c 670 g 1086 t
ORIGIN
1 cgctgtgtgg ctgaaaagtg aaggcaagag ctgatttggc ctctgtgctc ccctccgcaa
61 ggggatcgtt ttctccagaa gagctggata ttctttcgcc cagttatggc agacaagtta
121 acgagaattg ctattgtcaa ccatgacaaa tgtaaaccta agaaatgtcg acaggaatgc
181 aaaaagagtt gtcctgtagt tcgaatggga aaattatgca tagaggttac accccagagc
241 aaaatagcat ggatttccga aactctttgt attggttgtg gtatctgtat taagaaatgc
301 ccctttggcg ccttatcaat tgtcaatcta ccaagcaact tggaaaaaga aaccacacat
361 cgatattgtg ccaatgcctt caaacttcac aggttgccta tccctcgtcc aggtgaagtt
421 ttgggattag ttggaactaa tggtattgga aagtcaactg ctttaaaaat tttagcagga
481 aaacaaaagc caaaccttgg aaagtacgat gatcctcctg actggcagga gattttgact
541 tatttccgtg gatctgaatt acaaaattac tttacaaaga ttctagaaga tgacctaaaa
601 gccatcatca aacctcaata tgtagaccag attcctaagg ctgcaaaggg gacagtggga
661 tctattttgg accgaaaaga tgaaacaaag acacaggcaa ttgtatgtca gcagcttgat
721 ttaacccacc taaaagaacg aaatgttgaa gatctttcag gaggagagtt gcagagattt
781 gcttgtgctg tcgtttgcat acagaaagct gatattttca tgtttgatga gccttctagt
841 tacctagatg tcaagcagcg tttaaaggct gctattacta tacgatctct aataaatcca
901 gatagatata tcattgtggt ggaacatgat ctaagtgtat tagactatct ctccgacttc
961 atctgctgtt tatatggtgt accaagcgcc tatggagttg tcactatgcc ttttagtgta
1021 agagaaggca taaacatttt tttggatggc tatgttccaa cagaaaactt gagattcaga
1081 gatgcatcac ttgtttttaa agtggctgag acagcaaatg aagaagaagt taaaaagatg
1141 tgtatgtata aatatccagg aatgaagaaa aaaatgggag aatttgagct agcaattgta
1201 gctggagagt ttacagattc tgaaattatg gtgatgctgg gggaaaatgg aacgggtaaa
1261 acgacattta tcagaatgct tgctggaaga cttaaacctg atgaaggagg agaagtacca
1321 gttctaaatg tcagttataa gccacagaaa attagtccca aatcaactgg aagtgttcgc
1381 cagttactac atgaaaagat aagagatgct tatactcacc cacaatttgt gaccgatgta
1441 atgaagcctc tgcaaattga aaacatcatt gatcaagagg tgcagacatt atctggtggt
1501 gaactacagc gagtagcttt agccctttgc ttgggcaaac ctgctgatgt ctatttaatt
1561 gatgaaccat ctgcatattt ggattctgag caaagactga tggcagctcg agttgtcaaa
1621 cgtttcatac tccatgcaaa aaagacagcc tttgttgtgg aacatgactt catcatggcc
1681 acctatctag cggatcgcgt catcgttttt gatggtgttc catctaagaa cacagttgca
1741 aacagtcctc aaaccctttt ggctggcatg aataaatttt tgtctcagct tgaaattaca
1801 ttcagaagag atccaaacaa ctataggcca cgaataaaca aacttaattc aattaaggat
1861 gtagaacaaa agaagagtgg aaactacttt ttcttggatg attagactga ctctgagaat
1921 attgataagc catttattaa aaggagtatt tactagaatt ttttgtcata taaaacttga
1981 atcaggattt tatgccccac atactctgga acttgaagta taatatactt aatataacat
2041 aaaaagccag ttgggttcta aattgtagtt gaaacacaga aaatgccact tttctgttcc
2101 tgaagaggct cttttgtgca taatattcta aaatgaagac atttcaagct atacaaatta
2161 cttccaagtt ttcatgatgt atgggaagat tttcagtagg tgtattatat tcacggtacc
2221 aaatgctgac cagtgttgct ccatttttta aatcttgaaa agggtttctg tacttacctg
2281 gtttgccaag tatgccagtg taatgaaact gcccttattt taaaagccag tcaaagattc
2341 cactgattga catttgataa ataaacatca ggattatgtt tattgtttgt tttcagtctt
2401 tgcactatat taccagtata tggtttccga ggaagattat ctactgcaaa acaccactgt
2461 tggaaaaata ggtattttta aattgttttt aatctttttt ggtgctttta aacatgttta
2521 gcaaaaacca attcagttcc attccccgca aaaaacccct aactttactc tgaacttttt
2581 ttgtttttgc attccatgag gttctgtatt cagtcattct ctaggtaatg tcatttttgt
2641 acacatatat ttatataatc actgattgag atttaggaaa aagcatttct aaagaatatt
2701 tgcttccctt agaactacag actcgaaatc tttaaagatg gtgcctaagc atctatgtat
2761 tttttttaag ttccacagat ttttctgttg ggcagccaag gattataaac cacttcccta
2821 aaggcaacat taatgcaaaa gtccccagat ggcaatacaa agtatcccct ggtaccacat
2881 atattcattt gtgagtttgg atatagagca cattatctaa accattttgt agttccaaaa
2941 acccatctaa atttcttgag ttcctgaatt ttgaacagga ttacctggag cctggagcca
3001 ctttaagttg tacttctgac taaactggaa ttatgagtga ggaagagtgt ttactaaata
3061 aatgactggg gcaagcaaaa ttgaggagga aattagaaac tgtttgacaa actttaagag
3121 ctacttgaaa taacagaagt cttgattaat atgcaaataa tggctagaaa gtatggttta
3181 actggaccct attatgcctt ttaaaaataa tttcagtaac ccataaatac atgttgtaaa
3241 aaattcaaat atacagaatg gaataaaaaa atgatctccc tttattaccc tcccaaaggt
3301 taccagcgtt tgaatttaat aatgtatatt ctttcatgct tttttctgtg cacttaccta
3361 agtgtgaata tgtaaagggt ttgttttgta tacaaatggg attatactaa aataagtaat
3421 gcctattttt aaggataggt taaatttgtg aatgatcatt tcaaatatat tgaataaaat
3481 aagcaaaagc taaaaaaaaa aaaaaaaa
//