LOCUS BC016181 4732 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens AMME chromosomal region gene 1-like, mRNA (cDNA clone
MGC:20482 IMAGE:4644159), complete cds.
ACCESSION BC016181
VERSION BC016181.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544150.
FEATURES Location/Qualifiers
source 1..4732
/db_xref="H-InvDB:HIT000088935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20482 IMAGE:4644159"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4732
/gene="AMMECR1L"
/gene_synonym="MGC4268"
/db_xref="GeneID:83607"
/db_xref="HGNC:HGNC:28658"
CDS 252..1184
/gene="AMMECR1L"
/gene_synonym="MGC4268"
/codon_start=1
/product="AMME chromosomal region gene 1-like"
/protein_id="AAH16181.1"
/db_xref="GeneID:83607"
/db_xref="HGNC:HGNC:28658"
/translation="MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGS
SSGPLQNHQHVDSSSGRENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNL
VVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAM
NLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIR
IEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYR
SEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS"
BASE COUNT 1253 a 1045 c 1124 g 1310 t
ORIGIN
1 gttggtgaag agatcaggaa gagatttctt cgagactaag gatggatgac ccttagcaac
61 agtgaccgtc tcctcccggc atagcaagat ggcctgccct caggtacagg aagaaggaat
121 ggaatcggaa ggaagaaaat tcattccaga gacaaaatag ctcccctcct ctgttgtagc
181 tgttcctctg gcaatacaaa ctttctgctt tcaggttctg cagcattcca gaccttgagc
241 actgaatcag gatgggaaaa agacgttgtg ttcctccact cgagcccaag ttggcagcag
301 gctgttgtgg ggtcaagaag cccaaattat ctggaagtgg aacgcacagt cacgggaatc
361 agtccacaac tgtccccggc tctagttcag gacctcttca aaaccaccag catgtggaca
421 gcagcagtgg acgggagaat gtgtcagact taactctggg acctggaaac tctcccatca
481 cacgaatgaa tcccgcatcg ggagcgctga gccctcttcc ccggcctaat ggaactgcca
541 acaccactaa gaatctggtg gtgactgcag agatgtgctg ctactgcttc gacgtactct
601 actgtcacct ctatggcttc ccacagccac gacttcctag attcaccaat gacccctatc
661 cgctctttgt gacgtggaag acagggcggg acaagcggct tcgtggctgc attgggacct
721 tctcagccat gaatcttcat tcaggactca gggaatacac gttaaccagt gcacttaagg
781 acagccgatt tccccccctg acccgagagg agctgcctaa acttttctgc tctgtctccc
841 tccttactaa ctttgaggat gccagtgatt acctggactg ggaggtaggg gtccatggga
901 ttcgaattga attcattaat gaaaaaggtg tcaaacgcac agccacatat ttacctgagg
961 ttgctaagga acaagactgg gatcagatcc agacaataga ctccttgctc aggaaaggtg
1021 gctttaaagc tccaattacc agtgaattca gaaaaacgat caaactcacc aggtaccgaa
1081 gtgagaaggt gacaatcagt tacgcagagt atattgcttc ccgacagcac tgtttccaga
1141 acggcactct tcatgccccg cccctctaca atcattactc ctgacacacg gctgcatgac
1201 cagtcccacc cccccgtggc caccaatggc tatgacatca ttggagcaga tgcctcctct
1261 tcctggtcca gttacttcta ttactgcacc attttatgat gctagcttcc gttgccaagt
1321 ctgcctcccg ctgactgagg gagggtaggg ttaccttgaa cgaaacagaa cttgaggggc
1381 ccaagcctta tctcagcctt tcctcaatat ggggttccgt tggattgggg ctcctccatg
1441 actagtggga attactgtgg gttcagaaga cccttgtctg gtatttgcca catggggtat
1501 tggccacacg ctggaagctg aaattgatga tccctgaagg ttgaacccac acacacccct
1561 gcagcctccc cagatgaagt aggtgtattc ccctggcagt ctgggcaacg gagaccaaga
1621 aacattttta ggttgtttta aattcctttt tttaaacttc cagtttattg cgtaccaaga
1681 gttgattaca acctccatgc ttcataagcg gacgccacgt tagggttgga cgtgggcacc
1741 acgagtcctt tgaggctcct ggacagagac ccacatcaag atcggaagcc ctttgggtgg
1801 cgttgcagat ctcattgctc agtaggccgt gaagattttc atcctcatcc cactctcagt
1861 tggattttct ggcactcttc ctgcattgag tctcctgatt actgaacaga gctccgtcat
1921 gtagcctgct gaggaatgga atggaatgga gatgcccaca ggaggtcctg atgtcatcac
1981 tgcacgcagg tgtgagagga gagacctctt ctgcaccgcc tggctacctc actcctctgc
2041 tggtagcagt gcctatagct ggacctaagt tctcagaagc gtagatgtgc aaacaagcga
2101 ttgagttggg ctttaggagg acacatcata ggagagaatc cagggtctgt aagctggttt
2161 tcttttcagg tgacatcctg aggggcctgt aagcagggga gctccttttt ctagtttgcc
2221 tgtagaggtg ggaagactgt tggtgtttct gtcctttaca ggacattagg aaacagttgt
2281 gtaattacac aaggtggacc tttatcttgc ctgacatgct gggaatcttc accccaccag
2341 ggcaaatttc caaatagctc attttattct aggtctttca aactttcatg tgacatattt
2401 ccctttccca ttgttgctga tttccaaatc gctgtcagca attttttcct ctctccttgc
2461 ctattcttca ctcatttggt ggcaaagttc atagaactag gggacttgga agatgctttg
2521 aaaatattgt tacaaaggca ctgctaaaat gattcacagg gagagtggcc agttggaaga
2581 aggatcctaa ggatgtgaca ctggttttca acaacatgct tagagaactc atgaagtgga
2641 ttgggtgtca acccagtgaa catgttttta tttaatttat tttttgaagt ttatgtggtg
2701 atggtgtggc tttccgaaat gggcaaatat tcagaagatc ttttgcattt tcttctgtca
2761 ggaatgggga aggggagtgg gggcacaatc tgagaaagga cacctgtgct gttctaggca
2821 tcgctggcaa gtttgtggga agggatgggc aagggtgagt gggtttgctc cacaccgtcc
2881 tgtgctgctc gagaggacct gggacgtgcg agggaaacgt gggtgacggt gcctaggctg
2941 cggcccttca ctgctgtgct gggttcctgc agcctgctac gtttcccttg gcaatgtaaa
3001 tgaagatgga ggggtcgttt cgtgatttcc tgctgctgag aataaatgtc ttgttaaaaa
3061 cgtggcaacg gttactctta ggtgccatgg atcgatgtca gggtggtcag ctctggacta
3121 agccacccac ctccaatttg tacaacagta ttgatacata gggctacact cattactgtt
3181 caagtgttct atgttaagag ttgtgtttaa tttctaaaga ttaaaaaaag caaaaaaatt
3241 ggtgctaaac cttcacccct gagcacgctc agtgagactg gtcatgcaag catttacagt
3301 gccatgctcc tcaagccgat tttttcttgt agaaatgttg ccctatttgt cttctccaat
3361 gtatggtatg ttattttatt ttattatttt attttatttt attttatttt atcgaggggg
3421 ggtacgatac ctgccattta agaaaatgaa tagaaaattt taaaacccga gaaatgggga
3481 aaaaaaaatc agtgcacaag aattgggctg gttaggccca gcaccacact gaagtgggct
3541 cagtggtttt tggagtgaag aagccttact ccctgcacat tccctcatgc tcccacacaa
3601 gtccagcaat ggaaatgctt gggttcctct tgctttgtca ggggactcag gagtcgacca
3661 agggaaacca tttggccccg tgaggaatgg gcattgtcag tatccgtcct gaacggggcc
3721 tagtcaggaa gcggtctaga agtgtacggt cacggtcgcc tcatgaaagt gtgtagcagg
3781 tggctctcag gaaaaatacc aagtctggat catccatgtg gcagctttgc atagggagag
3841 gatagctccg aactggaact gaactgcctt ctctgcacgc ttgaccaaag cagtgatgag
3901 ggcggccagt acctgcggtg tgcgtggtag gtttaaagaa aagggaatgt tttctgctga
3961 gtgtttcctt tgtccttggg ctgctcgagc tggacagtag gtaaccactg ttttcaagga
4021 ccagcccaat ttctctggct tggttcggag ttcgtttcat ccctagctgt gagtgccttt
4081 tggtctggaa agttggcttg tctcataata cccacagcta ggacattctc tctgtaatta
4141 tgaattgtcc ttgttttaca ttaaaagaga atgtctttga tcactagagt ctgtcggtgt
4201 tggattattt ccactgtgag attcttaaaa cttttttgct tcataataat aaaacaactc
4261 atgttagaga ccctttcaac atgaaaggtt tgtagttgag acattacata tattttattg
4321 tttataataa aaatcatcta tacaaaagaa gtcctgggtg ttaatatttt gcacaagatc
4381 tgttttccat gatgtgttga catctacaat ttcactaact gttgacgtta ttttctattg
4441 agattctgga gcctagggag ctatgtgttc tttttgttca tttcgttctt acttccctga
4501 agcaagagac tatatggcct tcagtgcaaa gacttcagac caattctttg tattacactt
4561 ggttgcctct tggctatata acttctgagt gcaaatcatt gaacacttta acgaagtatt
4621 gtagagaata aatcataatg gataaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//