LOCUS BC016045 1841 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, beta, mRNA (cDNA clone MGC:20387
IMAGE:4564532), complete cds.
ACCESSION BC016045
VERSION BC016045.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: g Column: 23.
FEATURES Location/Qualifiers
source 1..1841
/db_xref="H-InvDB:HIT000037462"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20387 IMAGE:4564532"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1841
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
CDS 76..1203
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/codon_start=1
/product="actin, beta"
/protein_id="AAH16045.1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
/translation="MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVPPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
BASE COUNT 429 a 539 c 452 g 421 t
ORIGIN
1 accgcgtccg ccccgcgagc acagagcctc gcctttgccg atccgccgcc cgtccacacc
61 cgccgccagc tcaccatgga tgatgatatc gccgcgctcg tcgtcgacaa cggctccggc
121 atgtgcaagg ccggcttcgc gggcgacgat gccccccggg ccgtcttccc ctccatcgtg
181 gggcgcccca ggcaccaggg cgtgatggtg ggcatgggtc agaaggattc ctatgtgggc
241 gacgaggccc agagcaagag aggcatcctc accctgaagt accccatcga gcacggcatc
301 gtcaccaact gggacgacat ggagaaaatc tggcaccaca ccttctacaa tgagctgcgt
361 gtgcctcccg aggagcaccc cgtgctgctg accgaggccc ccctgaaccc caaggccaac
421 cgcgagaaga tgacccagat catgtttgag accttcaaca ccccagccat gtacgttgct
481 atccaggctg tgctatccct gtacgcctct ggccgtacca ctggcatcgt gatggactcc
541 ggtgacgggg tcacccacac tgtgcccatc tacgaggggt atgccctccc ccatgccatc
601 ctgcgtctgg acctggctgg ccgggacctg actgactacc tcatgaagat cctcaccgag
661 cgcggctaca gcttcaccac cacggccgag cgggaaatcg tgcgtgacat taaggagaag
721 ctgtgctacg tcgccctgga cttcgagcaa gagatggcca cggctgcttc cagctcctcc
781 ctggagaaga gctacgagct gcctgacggc caggtcatca ccattggcaa tgagcggttc
841 cgctgccctg aggcactctt ccagccttcc ttcctgggca tggagtcctg tggcatccac
901 gaaactacct tcaactccat catgaagtgt gacgtggaca tccgcaaaga cctgtacgcc
961 aacacagtgc tgtctggcgg caccaccatg taccctggca ttgccgacag gatgcagaag
1021 gagatcactg ccctggcacc cagcacaatg aagatcaaga tcattgctcc tcctgagcgc
1081 aagtactccg tgtggatcgg cggctccatc ctggcctcgc tgtccacctt ccagcagatg
1141 tggatcagca agcaggagta tgacgagtcc ggcccctcca tcgtccaccg caaatgcttc
1201 taggcggact atgacttagt tgcgttacac cctttcttga caaaacctaa cttgcgcaga
1261 aaacaagatg agattggcat ggctttattt gttttttttg ttttgttttg gttttttttt
1321 tttttttggc ttgactcagg atttaaaaac tggaacggtg aaggtgacag cagtcggttg
1381 gagcgagcat cccccaaagt tcacaatgtg gccgaggact ttgattgcac attgttgttt
1441 ttttaatagt cattccaaat atgagatgca ttgttacagg aagtcccttg ccatcctaaa
1501 agccacccca cttctctcta aggagaatgg cccagtcctc tcccaagtcc acacagggga
1561 ggtgatagca ttgctttcgt gtaaattatg taatgcaaaa tttttttaat cttcgcctta
1621 atactttttt attttgtttt attttgaatg atgagccttc gtgccccccc ttcccccttt
1681 tttgtccccc aacttgagat gtatgaaggc ttttggtctc cctgggagtg ggtggaggca
1741 gccagggctt acctgtacac tgacttgaga ccagttgaat aaaagtgcac accttaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//