LOCUS BC016044 2205 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class II, type 9A, mRNA (cDNA clone
IMAGE:4549698), partial cds.
ACCESSION BC016044
VERSION BC016044.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: b Column: 17.
FEATURES Location/Qualifiers
source 1..2205
/db_xref="H-InvDB:HIT000088911"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4549698"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2205
/gene="ATP9A"
/gene_synonym="ATPIIA"
/db_xref="GeneID:10079"
/db_xref="HGNC:HGNC:13540"
/db_xref="MIM:609126"
CDS <1..140
/gene="ATP9A"
/gene_synonym="ATPIIA"
/codon_start=3
/product="ATP9A protein"
/protein_id="AAH16044.1"
/db_xref="GeneID:10079"
/db_xref="HGNC:HGNC:13540"
/db_xref="MIM:609126"
/translation="RQCSPQTFLLCCLSRTGAEAVKGEKYRHSSANCHVVGPSHQWAA
G"
BASE COUNT 564 a 486 c 462 g 693 t
ORIGIN
1 ctcgtcagtg ttcaccacaa acctttttac tctgttgtct cagccgcact ggggcggagg
61 cggtcaaggg tgagaagtac cgacactcaa gtgcaaactg ccacgtcgtt ggcccatccc
121 atcagtgggc agctggctga cgccattcac tggacggtcc ctgaacacct aggaatgcac
181 acaccgtgct tctcagacac tggagacgca aaggcaggag gatgcagtcc ggtgagagga
241 cacgatcttt acctgcacaa tcagactgta agcccagcag agaaccccag gggcgcctgg
301 gtacttctcg gaggtcatct tagttgtggt ggggaagaca aagaaataag caaacaagaa
361 actagagtta ctatacaaga aactctcctg agtttgtaaa ccttaagcat aaggattcag
421 ttgacctttt tcttggttca tcaatctgga aagaacttac ataaagcgcc attgacactg
481 tcacctggga gctccatggg ccgtaagtct ttgacagcca atttaatttg aggtcagagg
541 gccttgaggt acacagtcag cactgtttga acacttttcc tgaaagcaaa actcacagct
601 ccctgcgccc tctgacaaca ctagctattt ctgccagagt aagaacttct attactattt
661 tattattgtt catatgtctt ttgatgatgg ttgtgtgaca gggggaagca ggatctattt
721 ggtttcttcc ccctcccccc accccttcct ttttgtctct cttttttttt ctctaagaaa
781 atcaccagac tagtttttcc atcttgagta atttcttatg tgggacagtt ttgatcctca
841 ttttgaaagc atgcgtgtgc acatgtgtgt tgcctgtggt gccaggtgag acaggtggca
901 ctaactccag ctgcttggaa ggcatcccaa gggcgcatct taaagttgga gcagacctcc
961 cttttccagc ccctggggcc attagaccac gtgctggaac tagcattgta aaattcccat
1021 cccagttcca ctcccctgaa gtgaaaccct tttttttttg tgacagtaaa tcttaaaaat
1081 cattgtctct ttatgaacat ttcctcagtt tcttctctgc tgaaaatgta agccatgcta
1141 ctttttaatg tattttgaat tttgtgctca ttggaaattg atatgctaat gcctccccca
1201 ccccccgcca gacttttctt tttatacttt gtcttgtttt tactggggta ggctgggcat
1261 gcgtgcgtgc ctttagggca gcattttaaa cctttgccaa aattgcaaat gggacatgta
1321 cattcttctg ctccatccta cttaaacacc tatcagctat ttttatcttt aaccttttct
1381 gtatgtttga agtgtgtggg gggtgtgtgt gtgtgtgaaa gagcgagaga atgatgtcat
1441 ctaaagtttt ttgaagaatt atttggtttt cattgcatta aaattctatc actcccagct
1501 ttgttttcat ttaaaaaaat atacaaagag ctttgtaaat acaacacatt ttatttctcc
1561 cccttctttt aatgtacagc ttttttgcca cttatatata cttaaaatat tcccatgaat
1621 tatgtccagt tcttcttgga aaaaaatttg gttttgaatg aacctgcaaa gcatcctgca
1681 gcgtgagcag ctcctccacc tggagctccg aagcatcttc tcaggccaaa gcggcattac
1741 ccgtgaatct gtcttctccg ccacagcatg gtttgaggcg cagtctgtta atatagctgg
1801 gccatgtcag tgactgttgt gtttgtgggg tcaggtgggg ggcatggtat ttgcaaaaaa
1861 aacaaattat ggctaattta ttattttgtt gcagtggggt taactgtaaa ctcatgtaag
1921 agtctgtgat ttcctcattg gttgatctct ctctctgtaa tcctcattgc aaattttcac
1981 caggacagcg ttttttgatt agaggggagc tctggcacag tatgctttaa tttagcagga
2041 acttccagat gatttaaatt ctcgatgctg tgatgacaca catatgatct ttcgtgtttc
2101 tgagcgactc tactttcatt gtttgccagc gtggctcgtt gctgttgccc aataaagctt
2161 gtgtacgttc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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