LOCUS BC015960 818 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16,
inhibits CDK4), mRNA (cDNA clone IMAGE:3954155), partial cds.
ACCESSION BC015960
VERSION BC015960.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 818)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 818)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC015960.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: j Column: 9.
FEATURES Location/Qualifiers
source 1..818
/db_xref="H-InvDB:HIT000037424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3954155"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..818
/gene="CDKN2A"
/gene_synonym="ARF"
/gene_synonym="CDK4I"
/gene_synonym="CMM2"
/gene_synonym="INK4"
/gene_synonym="INK4a"
/gene_synonym="MTS1"
/gene_synonym="p14"
/gene_synonym="p14ARF"
/gene_synonym="p16"
/gene_synonym="p16INK4"
/gene_synonym="p16INK4a"
/gene_synonym="p19"
/gene_synonym="TP16"
/db_xref="GeneID:1029"
/db_xref="HGNC:HGNC:1787"
/db_xref="MIM:600160"
CDS <1..449
/gene="CDKN2A"
/gene_synonym="ARF"
/gene_synonym="CDK4I"
/gene_synonym="CMM2"
/gene_synonym="INK4"
/gene_synonym="INK4a"
/gene_synonym="MTS1"
/gene_synonym="p14"
/gene_synonym="p14ARF"
/gene_synonym="p16"
/gene_synonym="p16INK4"
/gene_synonym="p16INK4a"
/gene_synonym="p19"
/gene_synonym="TP16"
/codon_start=3
/product="CDKN2A protein"
/protein_id="AAH15960.3"
/db_xref="GeneID:1029"
/db_xref="HGNC:HGNC:1787"
/db_xref="MIM:600160"
/translation="KGGAAAAELGPGGGENMVRRFLVTLRIRRACGPPRVRVFVVHIS
WFTGEWAAPGAPAAVALVLMLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQL
RRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLGPSARGPG"
BASE COUNT 177 a 243 c 247 g 151 t
ORIGIN
1 caaagggcgg cgcagcggct gccgagctcg gccctggagg cggcgagaac atggtgcgca
61 ggttcttggt gaccctccgg attcggcgcg cgtgcggccc gccgcgagtg agggttttcg
121 tggttcacat ctcgtggttc acgggggagt gggcagcgcc aggggcgccc gccgctgtgg
181 ccctcgtgct gatgctactg aggagccagc gtctagggca gcagccgctt cctagaagac
241 caggtcatga tgatgggcag cgcccgagtg gcggagctgc tgctgctcca cggcgcggag
301 cccaactgcg ccgaccccgc cactctcacc cgacccgtgc acgacgctgc ccgggagggc
361 ttcctggaca cgctggtggt gctgcaccgg gccggggcgc ggctggacgt gcgcgatgcc
421 tggggccgtc tgcccgtgga cctggctgag gagctgggcc atcgcgatgt cgcacggtac
481 ctgcgcgcgg ctgcgggggg caccagaggc agtaaccatg cccgcataga tgccgcggaa
541 ggtccctcag acatccccga ttgaaagaac cagagaggct ctgagaaacc tccggaaact
601 tagatcatca gtcaccgaag gtcctacagg gccacaactg cccccgccac aacccacccc
661 gctttcgtag ttttcattta gaaaatagag cttttaaaaa tgtcctgcct tttaacgtag
721 atatatgcct tcccccacta ccgtaaatgt ccatttatat cattttttat atattcttat
781 aaaaatgtaa aaaagaaaaa aaaaaaaaaa aaaaaaaa
//