LOCUS BC015931 2875 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB35, member RAS oncogene family, mRNA (cDNA clone
MGC:8924 IMAGE:3907209), complete cds.
ACCESSION BC015931
VERSION BC015931.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015931.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: b Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016920.
FEATURES Location/Qualifiers
source 1..2875
/db_xref="H-InvDB:HIT000037406"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8924 IMAGE:3907209"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2875
/gene="RAB35"
/gene_synonym="H-ray"
/gene_synonym="RAB1C"
/gene_synonym="RAY"
/db_xref="GeneID:11021"
/db_xref="HGNC:HGNC:9774"
/db_xref="MIM:604199"
CDS 105..710
/gene="RAB35"
/gene_synonym="H-ray"
/gene_synonym="RAB1C"
/gene_synonym="RAY"
/codon_start=1
/product="RAB35, member RAS oncogene family"
/protein_id="AAH15931.1"
/db_xref="GeneID:11021"
/db_xref="HGNC:HGNC:9774"
/db_xref="MIM:604199"
/translation="MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVD
FKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW
LHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEM
FNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKRKKRCC"
BASE COUNT 616 a 800 c 839 g 620 t
ORIGIN
1 tgttcgggaa gtggatccgc cgctgccgga gcagcccgaa gggagctgcg gatcgcgagg
61 ccagtaccga ccccgcccgc ccgcgcgcac cgcccccgcc cgccatggcc cgggactacg
121 accacctctt caagctgctc atcatcggcg acagcggtgt gggcaagagc agtttactgt
181 tgcgttttgc agacaacact ttctcaggca gctacatcac cacgatcgga gtggatttca
241 agatccggac cgtggagatc aacggggaga aggtgaagct gcagatctgg gacacagcgg
301 ggcaggagcg cttccgcacc atcacctcca cgtattatcg ggggacccac ggggtcattg
361 tggtttacga cgtcaccagt gccgagtcct ttgtcaacgt caagcggtgg cttcacgaaa
421 tcaaccagaa ctgtgatgat gtgtgccgaa tattagtggg taataagaat gacgaccctg
481 agcggaaggt ggtggagacg gaagatgcct acaaattcgc cgggcagatg ggcatccagt
541 tgttcgagac cagcgccaag gagaatgtca acgtggaaga gatgttcaac tgcatcacgg
601 agctggtcct ccgagcaaag aaagacaacc tggcaaaaca gcagcagcaa caacagaacg
661 atgtggtgaa gctcacgaag aacagtaaac gaaagaaacg ctgctgctaa tggcacccag
721 tccactgcag agactgcact gcggtccctc ccccagcccg aggcccacgg aggttcctcg
781 ggggacagtc tcagtttcgt gccgttattt aaagaattct ctccatgttt ttgtatcggg
841 aggtgccatc ggcacttcct cccccgccct cctcgagtgc caagaaggtg ttggaccagc
901 ccgcccttcc ctactggtgc cccctcctcc ccggccaagg cgcctggacc tggcgaggac
961 gctgcccgcc gagcggactg attcgcagag tctgtacata gtgtatattg ctctacccgg
1021 ccgcacacca cgtcctgctc tggcttttgc cttcttgatg ccagcctgct gcaacagacc
1081 ctccccgcgc ccctccccag cccatcttac tgcaagcagc gtcctgagga gacagcggca
1141 cgttctagct gcgtctgcgg ccagcccgtg ccagtggagt gggctccgcg ttgctcattc
1201 tctccgacag gttgtcagcc tctgtccccg ctgcacaggg tcttgcccct tctccagggc
1261 ctgtgccagc tcccttccct ccccgttgtc ctgtccccac agccattctg ggagctgggg
1321 aacctggtct caaggcaggc cctgcagttc cacagaggtg gcaggtcttg ccctttggcc
1381 aacagatttc ttgtcctgcc ttctagatgc ctctgagctc caaacccagg gcagccatgg
1441 cttctcattt acaccaacag gtttcagttc caacagaaag gtcggggtag gttcgtgcag
1501 agatggggct ggcagggggg ctatgggagg attattttaa cagatcaaga aaatgaagcc
1561 aaatcaagtg aattaaattc ctcacaatta ttttctttcc ctgaggtttg attggcacag
1621 cagcaaaagt tgaggccacc ccacttgtgt ccactgtttt tagaaaaaaa tgaatggctt
1681 cctgccattg tggggctgga ctcttgggct ttcttggtgg gagcggagaa ggggcctccc
1741 acccttgtcc gagttgcctc ccactggagg tcaggagtct acactgcagc ctcaggcact
1801 gtggggagtg catgcctggg gcctctgggt ggggaccatg gacaggccct ggtcactgtc
1861 ctaacctttg tcaggacaaa ggtagcaaga ggatttcctg gcgggtggga aggaatggct
1921 ggggcggcca gttttgacac gccccagtgc cctggagaac aaccagggtc atctgcactt
1981 gatgactgct ccccgacccc cagcccggac acctcattcc cctcccacta cagggatcaa
2041 gtgacctggg aagaaccgag ttcaacacca ggatgtgttt ccttagattt cctttcctag
2101 gcgatttcca gggagagccc tgattggaca atcacatcac agatcacact gcagtttcca
2161 tgttagcact gtggatgggt ttttaatcaa taaaaactgg gggtttcttc tcaccgactc
2221 tccacttgcc caaactgcca aaagctggtg attctgggac aggccttcac tttggagcca
2281 cgggatgggg tgggggagcc ccatgggcct gggaaggagg gtgctgtgga gggggctgca
2341 gggctgacca gcaggcagcc tcatctggtc gggggcgggg gcggcaggag cagaagcggg
2401 gtctccgtcc ttgggactgt cctggttggc cacgggccct gaggatgcac ggtgcctggg
2461 gctcctgtgc cggtgggcgg ggggcatgct ggcctctgag cgatcaggcg aggccagcga
2521 gggtgtgctt gcaaattcaa gcaataagag gggggttcct gggggcttcc agcccaggct
2581 agaagccccc atggcttctg gcagctggac atcagcccca ggtattgggg tgattttggt
2641 catgacagtg tgcctgtccc actgttacac gcatgaatgg gggttatggg gtgggggtgg
2701 ggactcaggg ctggaccgac gtcctagtgg acctgatgtg aaattcctgt caaacaaaca
2761 ccacttttca atggtttgct aggagtattt ctgtattgaa agtttctaat tatgcttttt
2821 aaaaaaatac taaaaataaa ggttcaagct gccaaatttt aaaaaaaaaa aaaaa
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