LOCUS BC015909 1711 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4,
mRNA (cDNA clone MGC:19918 IMAGE:4648478), complete cds.
ACCESSION BC015909
VERSION BC015909.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1711)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1711)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50409737.
FEATURES Location/Qualifiers
source 1..1711
/db_xref="H-InvDB:HIT000037388"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19918 IMAGE:4648478"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1711
/gene="ARL6IP4"
/gene_synonym="MGC814"
/gene_synonym="SR-25"
/gene_synonym="SRp25"
/db_xref="GeneID:51329"
/db_xref="HGNC:HGNC:18076"
/db_xref="MIM:607668"
CDS 329..1411
/gene="ARL6IP4"
/gene_synonym="MGC814"
/gene_synonym="SR-25"
/gene_synonym="SRp25"
/codon_start=1
/product="ADP-ribosylation-like factor 6 interacting
protein 4"
/protein_id="AAH15909.2"
/db_xref="GeneID:51329"
/db_xref="HGNC:HGNC:18076"
/db_xref="MIM:607668"
/translation="MERAGPAGEEGGAREGRLLPRAPGAWVLRACAERAALEVGAASA
DTGVRGCGARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPP
LPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCS
ASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSS
SSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEE
DGPVLTDEQKSRIQAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTK
ERHREINKQATRGDCLAFQMRAGLLP"
BASE COUNT 393 a 485 c 576 g 257 t
ORIGIN
1 ctgtcattgt ggaagagttg caacttgggg gcccgagatt ggatgaagcg cacagccacg
61 ctttgggtta cacatttgaa actcaggggg cttccatatt gcagtcttga gtttggtctc
121 cctgggaagg tggggcacca gccccatgcc acgttgcacg tatcagctgg agcagaatcc
181 tggcttcctt ccggatgggc ctggggtcca tgcccgcgct cactgccaag atctttctgg
241 cccctacgga cacgagtttg cgacctctga gtcactgggt gggcgcgtcg gaaagaccag
301 ggcgcctcag tctggagctc gcagtcgtat ggagagggca ggaccagccg gggaggaggg
361 cggcgcgcgc gagggtcgcc ttcttcccag ggcaccgggg gcgtgggtgc tgcgggcgtg
421 cgccgagagg gcagccttgg aagtgggcgc agcttcggca gacacaggcg tgaggggctg
481 cggagctcga gggccggcgc ccctgcttgc ctctgcggga ggtgggcgcg cccgggacgg
541 aacctggggc gtcagaacga aaggcagcgg cgccgcgctt cccagccggc cagcctcccg
601 cgcagcgccc cggccggaag cctcctcgcc gccgcttcct ctcgagaagg cgcggggcgg
661 gctgtccggc ccgcagggcg gtcgagcccg cggcgccatg gctcacgtcg gctcccgcaa
721 gcgctcgagg agtcgcagcc ggtcccgggg acgggggtcg gaaaagagaa agaagaagag
781 caggaaagac acctcgagga actgctcggc ctccacatcc caaggtcgca aggccagcac
841 ggcccctggg gcggaggcct caccttctcc ctgcatcaca gagagaagca agcagaaggc
901 ccggaggaga acaagatcca gctcctcctc ctcttcttcc agttcttcta gctcctcttc
961 ttcctcctcg tcctcctcct cttcctccag tgatggccgg aagaagcggg ggaagtacaa
1021 ggacaagagg aggaagaaga agaagaagag gaagaagctg aagaagaagg gcaaggagaa
1081 ggcggaagca cagcaggtgg aggctctgcc gggcccctcg ctggaccagt ggcaccgatc
1141 agctggggag gaagaggatg gcccagtcct gacggatgag cagaagtccc gaatccaggc
1201 catgaagccc atgaccaagg aggagtggga tgcccggcag agcatcatcc gcaaggtggt
1261 ggaccctgag acggggcgca ccaggcttat taagggagat ggcgaggtcc tagaggaaat
1321 cgtaaccaaa gaacgacaca gagagatcaa caagcaagcc acccgagggg actgcctggc
1381 cttccagatg cgagctgggt tgcttccctg agggcccccg ctggccaagg cctgtggacg
1441 acgctggcgg cccagcctgg gcaggtttca gggtgccagt gggaagcctg atgggtgctg
1501 gtggcctttc ccccgtggat tggtctctgg cccagcccag tctcttctca ggggcagggg
1561 gtggaggttg gggtcaccgg cctgcttggc acccccatct gaaagagcag cacttctcag
1621 ctattaaagg ccccctggat agacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//