LOCUS BC015886 3055 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens RGM domain family, member A, mRNA (cDNA clone
IMAGE:3909548), partial cds.
ACCESSION BC015886
VERSION BC015886.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3055)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3055)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: f Column: 16.
FEATURES Location/Qualifiers
source 1..3055
/db_xref="H-InvDB:HIT000037377"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3909548"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3055
/gene="RGMA"
/gene_synonym="RGM"
/db_xref="GeneID:56963"
/db_xref="HGNC:HGNC:30308"
/db_xref="MIM:607362"
CDS <1..1459
/gene="RGMA"
/gene_synonym="RGM"
/codon_start=2
/product="RGMA protein"
/protein_id="AAH15886.2"
/db_xref="GeneID:56963"
/db_xref="HGNC:HGNC:30308"
/db_xref="MIM:607362"
/translation="ARGRGGRSLPARCSRRRSEAALSSQRDLFSSPFFLNSSSRERLV
VTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATSGSHAP
ASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPR
LRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKV
QGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPA
AFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEE
VVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPY
ETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYE
RTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC"
BASE COUNT 560 a 1045 c 864 g 586 t
ORIGIN
1 cgcccgcggc cgaggtggac ggagcctccc ggctcgctgc tcccgccggc ggagcgaggc
61 tgccctttct tcgcagcgtg atttattttc ttctcctttt tttctgaact cttcttccag
121 ggagaggcta gtggtaacag gccgagctgg atggatgggt atggggagag gggcaggacg
181 ttcagccctg ggattctggc cgaccctcgc cttccttctc tgcagcttcc ccgcagccac
241 ctccccgtgc aagatcctca agtgcaactc tgagttctgg agcgccacgt cgggcagcca
301 cgccccagcc tcagacgaca cccccgagtt ctgtgcagcc ttgcgcagct acgccctgtg
361 cacgcggcgg acggcccgca cctgccgggg tgacctggcc taccactcgg ccgtccatgg
421 catagaggac ctcatgagcc agcacaactg ctccaaggat ggccccacct cgcagccacg
481 cctgcgcacg ctcccaccgg ccggagacag ccaggagcgc tcggacagcc ccgagatctg
541 ccattacgag aagagctttc acaagcactc ggccaccccc aactacacgc actgtggcct
601 cttcggggac ccacacctca ggactttcac cgaccgcttc cagacctgca aggtgcaggg
661 cgcctggccg ctcatcgaca ataattacct gaacgtgcag gtcaccaaca cgcctgtgct
721 gcccggctca gcggccactg ccaccagcaa gctcaccatc atcttcaaga acttccagga
781 gtgtgtggac cagaaggtgt accaggctga gatggacgag ctcccggccg ccttcgtgga
841 tggctctaag aacggtgggg acaagcacgg ggccaacagc ctgaagatca ctgagaaggt
901 gtcaggccag cacgtggaga tccaggccaa gtacatcggc accaccatcg tggtgcgcca
961 ggtgggccgc tacctgacct ttgccgtccg catgccagag gaagtggtca atgctgtgga
1021 ggactgggac agccagggtc tctacctctg cctgcggggc tgccccctca accagcagat
1081 cgacttccag gccttccaca ccaatgctga gggcaccggt gcccgcaggc tggcagccgc
1141 cagccctgca cccacagccc ccgagacctt cccatacgag acagccgtgg ccaagtgcaa
1201 ggagaagctg ccggtggagg acctgtacta ccaggcctgc gtcttcgacc tcctcaccac
1261 gggcgacgtg aacttcacac tggccgccta ctacgcgttg gaggatgtca agatgctcca
1321 ctccaacaaa gacaaactgc acctgtatga gaggactcgg gacctgccag gcagggcggc
1381 tgcggggctg cccctggccc cccggcccct cctgggcgcc ctggtcccgc tcctggccct
1441 gctccctgtg ttctgctaga cgcgtagatg tggagggagg cgcgggctcc gtcctctcgg
1501 cttccccatg tgtgggctgg gaccgcccac ggggtgcaga tctcctggcg tgtccaccat
1561 ggccccgcag aacgccaggg accgcctgct gccaagggct caggcatgga cccctcccct
1621 tctagtgcac gtgacaaggt tgtggtgact ggtgccgtga tgtttgacag tagagctgtg
1681 tgagagggag agcagctccc ctcgccccgc ccctgcagtg tgaatgtgtg aaacatcccc
1741 tcaggctgaa gccccccacc cccaccagag acacactggg aaccgtcaga gtcagctcct
1801 tccccctcgc aatgcactga aaggcccggc cgactgctgc tcgctgatcc gtggggcccc
1861 ctgtgcccgc cacacgcacg cacacactct tacacgagag cacactcgat ccccctaggc
1921 cagcggggac accccagcca cacagggagg catccttggg gcttggcccc aggcagggca
1981 accccggggc gctgcttggc accttagcag actgctggaa ccttttggcc agtaggtcgt
2041 gcccgcctgg tgccttctgg cctgtggcct ccctgcccat gttcacctgg ctgctgtggg
2101 taccagtgca ggtcccggtt ttcaggcacc tgctcagctg cccgtctctg gcctgggccc
2161 ctgccccttc caccctgtgc ttagaaagtc gaagtgcttg gttctaaatg tctaaacaga
2221 gaagagatcc ttgacttctg ttcctctccc tcctgcagat gcaagagctc ctgggcaggg
2281 gtgcctgggc cccagggtgt ggcaggagac ccagtggatg gggccagctg gcctgccctg
2341 atcctctgct tcctcctcac aaccccaaga gcccccagcc cggtccatcc acgtctggag
2401 tctggggaga ggagcagggt cttaggactc tcagctctga gcatccctgg cagggtcttc
2461 aacctctaat ctcttccctt aagccctgtg gccacacagc caggagagac ttgccgctgg
2521 ctcccgcctc atttcagccc agggtgctca tccaggggcc cagaacagtc ccacctgtgc
2581 tgctatgccc acagcacaaa gccaggcttc actcccaaaa gtgcagccag gccctggagg
2641 gtgatcctgc cagcagccct acagctccac accctaccca cccatcggca gcccctctgc
2701 tgttccccag ggacctctca tacactggcc aggaggctgc agaacgtgtg tctccccctc
2761 cctccaagag gtcctgctcc ctctgccaga accgtgtgtg ggcgggtggg agggcgctcg
2821 gggcccggcc cctccctctc cctgctggtt ttagttggtc cctatgttgg aagtaaaaag
2881 tgaagcactt tattttggtt gtgtttgctc acgttctgct tggaagtggg gacccctcac
2941 tgcgtccacg tgtctgcgac ctgtgtggag tgtcaccgcg tgtacatact gtaaattatt
3001 tattaatggc taaatgcaag taaagtttgg tttttttgtt aaaaaaaaaa aaaaa
//