LOCUS BC015806 2943 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone
MGC:9446 IMAGE:3906722), complete cds.
ACCESSION BC015806
VERSION BC015806.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2943)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2943)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994241.
FEATURES Location/Qualifiers
source 1..2943
/db_xref="H-InvDB:HIT000037337"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9446 IMAGE:3906722"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2943
/gene="SH3KBP1"
/gene_synonym="CIN85"
/gene_synonym="GIG10"
/gene_synonym="MIG18"
/db_xref="GeneID:30011"
/db_xref="HGNC:HGNC:13867"
/db_xref="MIM:300374"
CDS 219..2216
/gene="SH3KBP1"
/gene_synonym="CIN85"
/gene_synonym="GIG10"
/gene_synonym="MIG18"
/codon_start=1
/product="SH3-domain kinase binding protein 1"
/protein_id="AAH15806.1"
/db_xref="GeneID:30011"
/db_xref="HGNC:HGNC:13867"
/db_xref="MIM:300374"
/translation="MVEAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGR
RGLFPDNFVREIKKEMKKDPLTNKAPEKPLHEVPSGNSLLSSETILRTNKRGERRRRR
CQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESD
ELGISQDEQLSKSSLRETTGSESDGGDSSSTKSEGANGTVATAAIQPKKVKGVGFGDI
FKDKPIKLRPRSIEVENDFLPVEKTIGKKLPATTATPDSSKTEMDSRTKSKDYCKVIF
PYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPDFEKEG
NRPKKPPPPSAPVIKQGAGTTERKHEIKKIPPERPEMLPNRTEEKERPEREPKLDLQK
PSVPAIPPKKPRPPKTNSLSRPGALPPRRPERPVGPLTHTRGDSPKIDLAGSSLSGIL
DKDLSDRSNDIDLEGFDSVVSSTEKLSHPTTSRPKATGRRPPSQSLTSSSLSSPDIFD
SPSPEEDKEEHISLAHRGVDASKKTSKTVTISQVSDNKASLPPKPGTMAAGGGGPAPL
SSAVPSPLSSSLGTAGHRANSPSLFGTEGKPKMEPAASSQAAVEELRTQVRELRSIIE
TMKDQQKREIKQLLSELDEEKKIRLRLQMEVNDIKKALQSK"
BASE COUNT 878 a 732 c 728 g 605 t
ORIGIN
1 caggagtcgc cccggggcag cagcggcagc agcagcagag gcagcagcgg gcggcgctga
61 gccgccgccg ccgccactga ggaagaagcc ggcccagccg ccgccgcgtc cggaccctcg
121 cgcctggatc ccagcgcccc gatcccggcg ccccaacccc cacgcccgcc tccgccaact
181 ttcacgctgc ctcggcggcc cggcccggct cgacgccaat ggtggaggcc atagtggagt
241 ttgactacca ggcccagcac gatgatgagc tgacgatcag cgtgggtgaa atcatcacca
301 acatcaggaa ggaggatgga ggctggtggg agggacagat caacggcagg agaggtttgt
361 tccctgacaa ctttgtaaga gaaataaaga aagagatgaa gaaagaccct ctcaccaaca
421 aagctccaga aaagcccctg cacgaagtgc ccagtggaaa ctctttgctg tcttctgaaa
481 cgattttaag aaccaataag agaggcgagc gacggaggcg ccggtgccag gtggcattca
541 gctacctgcc ccagaatgac gatgaacttg agctgaaagt tggcgacatc atagaggtgg
601 taggagaggt agaggaagga tggtgggaag gtgttctcaa cgggaagact ggaatgtttc
661 cttccaactt catcaaggag ctgtcagggg agtcggatga gcttggcatt tcccaggatg
721 agcagctatc caagtcaagt ttaagggaaa ccacaggctc cgagagtgat gggggtgact
781 caagcagcac caagtctgaa ggtgccaacg ggacagtggc aactgcagca atccagccca
841 agaaagttaa gggagtgggc tttggagaca ttttcaaaga caagccaatc aaactaagac
901 caaggtcaat tgaagtagaa aatgactttc tgccggtaga aaagactatt gggaagaagt
961 tacctgcaac tacagcaact ccagactcat caaaaacaga aatggacagc aggacaaaga
1021 gcaaggatta ctgcaaagta atatttccat atgaggcaca gaatgatgat gaattgacaa
1081 tcaaagaagg agatatagtc actctcatca ataaggactg catcgacgta ggctggtggg
1141 aaggagagct gaacggcaga cgaggcgtgt tccccgataa cttcgtgaag ttacttccac
1201 cggactttga aaaggaaggg aatagaccca agaagccacc gcctccatcc gctcctgtca
1261 tcaaacaagg ggcaggcacc actgagagaa aacatgaaat taaaaagata cctcctgaaa
1321 gaccagaaat gcttccaaac agaacagaag aaaaagaaag accagagaga gagccaaaac
1381 tggatttaca gaagccctcc gttcctgcca taccgccaaa aaagcctcgg ccacctaaga
1441 ccaattctct cagcagacct ggcgcactgc ccccgagaag gccggagaga ccggtgggtc
1501 cgctgacaca caccaggggt gacagtccaa agattgactt ggccggcagt tcgctatctg
1561 gcatcctgga caaagatctc tcggaccgca gcaatgacat tgacttagaa ggttttgact
1621 ccgtggtatc atctactgag aaactcagtc atccgaccac aagcagacca aaagctacag
1681 ggaggcggcc tccgtcccag tccctcacat cttcatccct ttcaagccct gatatcttcg
1741 actccccaag tcccgaagag gataaggagg aacacatttc acttgcgcac agaggagtgg
1801 acgcgtcaaa gaaaacttcc aagactgtta ccatatccca agtgtctgac aacaaagcat
1861 ccctgccgcc caagccgggg accatggcag caggtggcgg tgggccagcc cctctgtcct
1921 cagcggtgcc ctcccccctg tcatcctctt tgggaacagc tggacacaga gccaactccc
1981 cgtctctgtt cggcacggaa ggaaaaccaa agatggagcc tgcggccagc agccaggcgg
2041 ccgtggagga gctaaggaca caggtccgcg agctgaggag catcatcgag accatgaagg
2101 accagcagaa acgagagatt aaacagttat tgtctgagtt ggatgaagag aagaaaatcc
2161 ggcttcggtt gcagatggaa gtgaacgaca taaagaaagc tctacaatca aaatgaatac
2221 ttgatcaatg aaatgtcaca ttattcatcc tgagtccgag actcaaattt tctgccccag
2281 ccaaaataat cttgtgccaa aagattaaag gtttgcctca aaatgtccct gtttgaaaga
2341 ttagcacaaa agtcttgata gcacaacaca aattccatcc aagaggagaa tcttccccag
2401 ggtttagtcc tggggctggc actcgttgtg acttacacag agcaaaattg tgctaaaggc
2461 ttttctactc tgagatctca atgcgaaatg aaaactcagg cagtttagtc catagtggta
2521 ctattttgat gatattttcc attaatgaaa tgtaatttca gattattcgt ttacaagctt
2581 tataatttta tgatttttta atcgtgtttt gtcacagact tccctagtgt ttgtactaca
2641 cgtagtcaga agcgagtgtc cttttctttt gcttcaggct aagagctgcc tcgctctttg
2701 tccccccatt aggattctat tacatatgca attgtaggtt caacctgtcc ctttccctgc
2761 cagcaaaccc caccacccta agagaaattt tagcttatat atgacggtat atttacaaaa
2821 agagaaagag aaaatctggt atttgcaatg atctgtgcct tctttttacc accctcttga
2881 ttggagcttt tgtgatgcag ctaccatgat tcaaaaaaat taaaaattaa aaaaaaaaaa
2941 aaa
//