LOCUS BC015753 1125 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 2, mRNA (cDNA clone
MGC:23071 IMAGE:4875789), complete cds.
ACCESSION BC015753
VERSION BC015753.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1125)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1125)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: m Column: 16.
FEATURES Location/Qualifiers
source 1..1125
/db_xref="H-InvDB:HIT000037297"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23071 IMAGE:4875789"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1125
/gene="CXCL2"
/gene_synonym="CINC-2a"
/gene_synonym="GROb"
/gene_synonym="MGSA beta"
/gene_synonym="MGSA-b"
/gene_synonym="MIP-2a"
/gene_synonym="MIP2"
/gene_synonym="MIP2A"
/gene_synonym="SCYB2"
/db_xref="GeneID:2920"
/db_xref="HGNC:HGNC:4603"
/db_xref="MIM:139110"
CDS 65..388
/gene="CXCL2"
/gene_synonym="CINC-2a"
/gene_synonym="GROb"
/gene_synonym="MGSA beta"
/gene_synonym="MGSA-b"
/gene_synonym="MIP-2a"
/gene_synonym="MIP2"
/gene_synonym="MIP2A"
/gene_synonym="SCYB2"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 2"
/protein_id="AAH15753.1"
/db_xref="GeneID:2920"
/db_xref="HGNC:HGNC:4603"
/db_xref="MIM:139110"
/translation="MARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQ
CLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLK
NGKSN"
BASE COUNT 318 a 246 c 243 g 318 t
ORIGIN
1 gccacaggca gctccttgcc agctctcctc ctcgcacagc cgctcgaacc gcctgctgag
61 ccccatggcc cgcgccacgc tctccgccgc ccccagcaat ccccggctcc tgcgggtggc
121 gctgctgctc ctgctcctgg tggccgccag ccggcgcgca gcaggagcgc ccctggccac
181 tgaactgcgc tgccagtgct tgcagaccct gcagggaatt cacctcaaga acatccaaag
241 tgtgaaggtg aagtcccccg gaccccactg cgcccaaacc gaagtcatag ccacactcaa
301 gaatgggcag aaagcttgtc tcaaccccgc atcgcccatg gttaagaaaa tcatcgaaaa
361 gatgctgaaa aatggcaaat ccaactgacc agaaggaagg aggaagctta ttggtggctg
421 ttcctgaagg aggccctgcc cttacaggaa cagaagagga aagagagaca cagctgcaga
481 ggccacctgg attgcgccta atgtgtttga gcatcactta ggagaagtct tctatttatt
541 tatttattta tttatttatt tgtttgtttt agaagattct atgttaatat tttatgtgta
601 aaataaggtt atgattgaat ctacttgcac actctcccat tatatttatt gtttatttta
661 ggtcaaaccc aagttagttc aatcctgatt catatttaat ttgaagatag aaggtttgca
721 gatattctct agtcatttgt taatatttct tcgtgatgac atatcacatg tcagccactg
781 tgatagaggc tgaggaatcc aagaaaatgg ccagtaagat caatgtgacg gcagggaaat
841 gtatgtgtgt ctattttgta actgtaaaga tgaatgtcag ttgttattta ttgaaatgat
901 ttcacagtgt gtggtcaaca tttctcatgt tgaagcttta agaactaaaa tgttctaaat
961 atcccttgga cattttatgt ctttcttgta aggcatactg ccttgtttaa tgttaattat
1021 gcagtgtttc cctctgtgtt agagcagaga ggtttcgata tttattgatg ttttcacaaa
1081 gaacaggaaa ataaaatatt taaaaataaa aaaaaaaaaa aaaaa
//