LOCUS BC015744 961 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens L antigen family, member 3, mRNA (cDNA clone MGC:23038
IMAGE:4899044), complete cds.
ACCESSION BC015744
VERSION BC015744.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 961)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430136.
FEATURES Location/Qualifiers
source 1..961
/db_xref="H-InvDB:HIT000050633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23038 IMAGE:4899044"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..961
/gene="LAGE3"
/gene_synonym="CVG5"
/gene_synonym="DXS9879E"
/gene_synonym="DXS9951E"
/gene_synonym="ESO3"
/gene_synonym="ITBA2"
/db_xref="GeneID:8270"
/db_xref="HGNC:HGNC:26058"
/db_xref="MIM:300060"
CDS 343..774
/gene="LAGE3"
/gene_synonym="CVG5"
/gene_synonym="DXS9879E"
/gene_synonym="DXS9951E"
/gene_synonym="ESO3"
/gene_synonym="ITBA2"
/codon_start=1
/product="L antigen family, member 3"
/protein_id="AAH15744.2"
/db_xref="GeneID:8270"
/db_xref="HGNC:HGNC:26058"
/db_xref="MIM:300060"
/translation="MRDADADAGGGADGGDGRGGHSCRGGVDTAAAPAGGAPPAHAPG
PGRDAASAARGSRMRPHIFTLSVPFPTPLEAEIAHGSLAPDAEPHQRVVGKDLTVSGR
ILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR"
BASE COUNT 179 a 283 c 328 g 171 t
ORIGIN
1 ggcgaccacg gtgtcttcaa aagccccgtc agggttggct tcctggggcc ggaccgactg
61 tgggtcagtt tgcaccagcg ctctggaatc gagttacgcg cgaaagggca gagtttctgg
121 aggaaaccgc agcctctcaa ccgctgaccg ggtctcagaa ggcccccggc agggccgctt
181 ggcgggaact gaccacgcgc cagtcaggct ctccagggac ctgcgcaggc gcgtgtgggc
241 ggagtcgtgc gcagggggcg gggcttcggg aaggagccac agagagggcg gggcgtagga
301 cctgcgcttc gggggtggag tcggagcggc gcggcggcgg tcatgcggga cgcggatgca
361 gacgcaggcg gaggcgctga cggcggggat ggccggggtg gccacagctg ccgcgggggc
421 gtggacacag ccgcagctcc ggccggtgga gctcccccag cgcacgcgcc aggtccgggc
481 agagacgccg cgtctgcggc cagggggtca cgaatgcggc cgcacatatt caccctcagc
541 gtgcctttcc cgaccccctt ggaggcggaa atcgcccatg ggtccctggc accagatgcc
601 gagccccacc aaagggtggt tgggaaggat ctcacagtga gtggcaggat cctggtcgtc
661 cgctggaaag ctgaagactg tcgcctgctc cgaatttccg tcatcaactt tcttgaccag
721 ctttccctgg tggtgcggac catgcagcgc tttgggcccc ccgtttcccg ctaagcctgg
781 cctgggcaaa tggagcgagg tcccactttg cgtctccttg taggcagtgc gtccatcctt
841 ccctagggca ggaattccca cagttgctac tttcctggga gggcctcatg ttttatctgg
901 ttcttaaatg tttgttacta cagaaaataa aactgcgcta ctaaaaaaaa aaaaaaaaaa
961 a
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