LOCUS BC015726 3200 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FAD-dependent oxidoreductase domain containing 2, mRNA
(cDNA clone MGC:22928 IMAGE:4866761), complete cds.
ACCESSION BC015726
VERSION BC015726.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303916.
FEATURES Location/Qualifiers
source 1..3200
/db_xref="H-InvDB:HIT000037275"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22928 IMAGE:4866761"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3200
/gene="FOXRED2"
/gene_synonym="FLJ23322"
/db_xref="GeneID:80020"
/db_xref="HGNC:HGNC:26264"
CDS 18..2072
/gene="FOXRED2"
/gene_synonym="FLJ23322"
/codon_start=1
/product="FAD-dependent oxidoreductase domain containing
2"
/protein_id="AAH15726.1"
/db_xref="GeneID:80020"
/db_xref="HGNC:HGNC:26264"
/translation="MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQ
MAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSL
LSHDPRLLFRHYSRAYFPDARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNG
HYFILTDQKGQVHQCSVLLVATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLI
LGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLD
GLLESDLTDLAILKDSKGKFHVTPKFFLEEASTNQSADSITLPQDDNDNFAMRVPYDR
VIRCLGWNFDFSIFNKSLRLNSGNAFGKKYPLIRASYESKGSRGLFILGTASHSVDYR
KSAGGFIHGFRYTVRAVHRLLEHRHHSVTWPATELPITQLTSSIVRRVNEASGLYQMF
GVLADVILLKENSTAFEYLEEFPIQMLAQLETLTGRKAKHGLFVINMEYGRNFSGPDK
DVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLPTEQEVRFRPAHWPLPRPTAIHHIVED
FLTDWTAPIGHILPLRRFLENCLDTDLRSFYAESCFLFALTRQKLPPFCQQGYLRMQG
LVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGDQEPLGSPLAPGPLAQSVDSNKE
EL"
BASE COUNT 677 a 1028 c 815 g 680 t
ORIGIN
1 ccggagcggc tgggaggatg ggcctctccg ctgcggcccc gttgtggggt cccccggggc
61 tgctcctggc catcgccctg cacccagcgc tgtcggtgcc cccgcgccgg gactactgcg
121 tgctgggcgc tgggcccgcg ggcctgcaga tggcctactt cctgcagcgc gctggacgcg
181 actacgcagt gttcgagcgg gccccgcggc ccggcagctt cttcacacgc tacccgcggc
241 accgcaagct catcagcatc aacaagcggt acacgggcaa ggctaacgcc gagttcaacc
301 tccgccacga ctggaactct ctgctcagcc acgacccccg gctgctcttc agacactact
361 cgcgtgccta cttccccgac gcccgcgaca tggtgcgcta cctgggtgac ttcgcggaca
421 cgctggggct ccgtgtccag tacaacacca ccatcgccca cgtcactctg gacaaggacc
481 gacaggcctg gaatggccac tacttcatcc taactgacca gaagggccag gtgcatcagt
541 gcagcgtcct ccttgtagcc actggtttat cagtccccaa ccaggttgac ttccctggct
601 ccgaatatgc agagggttac gagtccgtgt ccgtggaccc tgaggacttt gtaggccaga
661 atgtgctgat cctgggtcgt gggaactcgg cctttgagac agcagagaac atcttgggtg
721 tcacaaactt tatccatatg ctcagccgct cccgggtccg tctgtcctgg gccacccact
781 acgttggaga cctcagagcc atcaacaatg gcctgctgga tacctaccag ctcaagtccc
841 tggacgggct gctcgagtct gacctgacgg atctggccat cctgaaggac agcaaaggca
901 agttccatgt caccccgaaa ttcttcctgg aagaagccag caccaaccag agtgccgact
961 ccatcaccct cccccaggac gacaatgaca actttgccat gcgcgtgccc tatgaccggg
1021 taatccgctg cctgggctgg aactttgact tctccatttt caataagtcc ctcagactta
1081 actcgggaaa tgcgttcggc aagaagtacc cgctgattcg agctagctac gaatccaaag
1141 gaagccgggg tctgtttatc ctgggtactg ccagccactc ggtggactac cggaaatctg
1201 ctgggggctt catccacgga ttccgataca cagtgcgtgc tgttcaccgg ctcctggagc
1261 accgccacca cagcgtcacc tggcccgcca ctgagctccc catcacacag ctgaccagct
1321 ccatcgtgcg gcgcgtgaat gaggcttctg ggctctacca gatgttcggt gtgctggccg
1381 atgtcatcct gttgaaggag aattccacgg cctttgagta cctggaggag ttccccatac
1441 agatgctggc ccagctggag acactcacag ggaggaaggc aaagcacggg ctcttcgtca
1501 tcaacatgga atatggcaga aatttctctg gccccgacaa ggacgtcttc tttgatgacc
1561 ggtctgtggg gcacacagaa gatgcctggc agtctaactt tcttcatcct gtcatctact
1621 actatagata cctccccacc gaacaggagg tgaggttccg ccctgcacac tggcccctgc
1681 ctcggcccac ggccatccat cacatcgtgg aagacttctt aacagactgg actgccccga
1741 tcgggcacat cctacctctg aggcgcttcc tggagaactg tttggacacc gatttgcgaa
1801 gcttctatgc agagtcctgc ttcctgttcg ccctcacgcg ccagaagttg ccaccctttt
1861 gccagcaggg gtacctgagg atgcagggac tcgtgagtac cgagagcctt tggcagcaca
1921 gagtggagag caggctcctg cgggactatg cccccacagg caggcgcctg gaggacagca
1981 gccagcagct tggcgaccaa gagccactag gttcccccct ggctccaggg cctctggctc
2041 agtccgtcga tagcaacaaa gaggagctct gactgtccct tcctaagctg tgggcacagt
2101 ggccaggcct ccccacctag gcccatggtc agtccctctt tccccgcaac ctcacactcc
2161 cgccaatgcg tgattgccaa agaccactca gatcatggca gtgtctgcag caaagccacc
2221 agatggcacg tgagggctga aagtcgggga tgcggtggtc tcctccctcc tgtcaggggg
2281 cagaagggca tcctctgcca ggtgggagct gccttcccca gcccagtttg tctgcaatgg
2341 agctgtcgct gagccccagg ccagcccagt tctgccccgt ctcaagtgct cctcttcctt
2401 ccaagcccct cctcagatgg gcctgcatcc cgcctgtgga gtgcttcaca ggggaaaccc
2461 atccgcatct taagggtttg tggcaagcgc tttaaaacaa aagctctgat atcctcaaca
2521 accacaacgg gcaggtggga ttgttgcccc agatgactgc tgaagacacc agctgtggga
2581 tgtcaagtaa ttccagggac ccccagctgg gagtccccgt ctgtgtcact tgccacacac
2641 tgcctcaacc tccccgcccc attttcagca gggtttgggc ttagctacag agcccaagag
2701 ggtcagccct gcttatcatc ataggcccag caggctgatc tcgagcagcg ataggacagc
2761 tccctgcaaa gccatcttag caactttctc actgagaagc aggattcaga gctgctctcc
2821 ccagttgcac cccctgactc atcttccagc tggctcttct ctcccatcct actcccttct
2881 gtctccctgc cctctgccat cctgaaccat gccttgcttc taacctgcct ggtcaagttt
2941 tgtgaaactt atcctgctgt ctcgggcggg cacccatatg tgctcaccat gtgtaaggtg
3001 acatttccaa atgcctttgt gtgataatga tgatgaattt ggttcctagt ctcttcttca
3061 ttgcccttcc tcaccagcaa tctgcacttt cccatcaggc atcttagtct catttgtaag
3121 tgcataagat aatcacagtg atttttcaaa gcccaggaaa aaaaaaaaaa aaaaaaaaaa
3181 aaaaaaaaaa aaaaaaaaaa
//