LOCUS BC015698 1206 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens ras homolog gene family, member T1, mRNA (cDNA clone
IMAGE:3906539), partial cds.
ACCESSION BC015698
VERSION BC015698.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1206)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1206)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015698.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: a Column: 4.
FEATURES Location/Qualifiers
source 1..1206
/db_xref="H-InvDB:HIT000088782"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3906539"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1206
/gene="RHOT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/db_xref="GeneID:55288"
/db_xref="HGNC:HGNC:21168"
CDS <1..477
/gene="RHOT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/codon_start=1
/product="RHOT1 protein"
/protein_id="AAH15698.1"
/db_xref="GeneID:55288"
/db_xref="HGNC:HGNC:21168"
/translation="IDKVTSRWIPLINERTDKDSRLPLILVGNKSDLVEYSSMETILP
IMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTR
IFKISDQDNDGTLNDAELNFFQRICFNTPLAPRFGFEQVLVLLFLQFWALLCTKHY"
BASE COUNT 387 a 207 c 230 g 382 t
ORIGIN
1 attgataagg taacaagtcg atggattcct ctcataaatg aaagaacaga caaagacagc
61 aggctgcctt taatattggt tgggaacaaa tctgatctgg tggaatatag tagtatggag
121 accatccttc ctattatgaa ccagtataca gaaatagaaa cctgtgtgga gtgttcagcg
181 aaaaacctga agaacatatc agagctcttt tattacgcac agaaagctgt tcttcatcct
241 acagggcccc tgtactgccc agaggagaag gagatgaaac cagcttgtat aaaagccctt
301 actcgtatat ttaaaatatc tgatcaagat aatgatggta ctctcaatga tgctgaactc
361 aacttctttc agaggatttg tttcaacact ccattagctc cacgttttgg cttcgagcaa
421 gttttggtgc tactgttttt gcagttttgg gctttgctat gtacaaagca ttattgaaac
481 agcgatgata taaaaagaaa tactgtccct accaaaaaca aatactttta tgtacattct
541 gaatgcttta agttctgcta gaattattga gatatttata catgcagagt tactttatta
601 atatttgtaa ttcatgcata agagtatttt aatgatagtt ataactgcag tattggctag
661 catatggaaa gaaaacagct aacagccaaa ctaaaatggc taaattccag aggccaaaag
721 ggaatatttt gtaaatatat gtacatattc aggcaagata tggtctccca agctgagttc
781 tagaaatgat gtttctagac atttctaagt ggtattgtta gtgctcactt ggctcactct
841 tctaggttta agttagccca gagattgtat ttactcatgg atcactttat ttatttcaca
901 tttactcaga atgatccttt gggttctata aggacataag gtacaatttg ccattgtctc
961 tccattttta aaaacataca agtcagtgtc agcttaccaa catgacattt tttcagtcag
1021 ttgtggtagg ccagccttga agccatcgca cagtctagaa acttgtgtag ctgagtgtgc
1081 agctcacctt taagggtgaa gttaggtaaa agcaattagc agaggcgtta tctatgtgat
1141 tatgttgctt ccttgtcagt atgttgaatt ttatagccct ttcaatgaaa taaaaaaaaa
1201 aaaaaa
//