LOCUS BC015642 1422 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade A (alpha-1
antiproteinase, antitrypsin), member 1, mRNA (cDNA clone MGC:23330
IMAGE:4644658), complete cds.
ACCESSION BC015642
VERSION BC015642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1422)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1422)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC015642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50363216.
FEATURES Location/Qualifiers
source 1..1422
/db_xref="H-InvDB:HIT000037235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23330 IMAGE:4644658"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1422
/gene="SERPINA1"
/gene_synonym="A1A"
/gene_synonym="A1AT"
/gene_synonym="AAT"
/gene_synonym="MGC23330"
/gene_synonym="MGC9222"
/gene_synonym="PI1"
/gene_synonym="PRO2275"
/db_xref="GeneID:5265"
/db_xref="HGNC:HGNC:8941"
/db_xref="MIM:107400"
CDS 28..1284
/gene="SERPINA1"
/gene_synonym="A1A"
/gene_synonym="A1AT"
/gene_synonym="AAT"
/gene_synonym="MGC23330"
/gene_synonym="MGC9222"
/gene_synonym="PI1"
/gene_synonym="PRO2275"
/codon_start=1
/product="serpin peptidase inhibitor, clade A (alpha-1
antiproteinase, antitrypsin), member 1"
/protein_id="AAH15642.1"
/db_xref="GeneID:5265"
/db_xref="HGNC:HGNC:8941"
/db_xref="MIM:107400"
/translation="MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDH
PTFNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILE
GLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKK
LYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIFFKGKW
ERPFEVKDTEEEDFHVDQATTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIF
FLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITK
VFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVKFNK
PFVFLMIEQNTKSPLFMGKVVNPTQK"
BASE COUNT 402 a 397 c 328 g 295 t
ORIGIN
1 ccactgacct gggacagtga atcgacaatg ccgtcttctg tctcgtgggg catcctcctg
61 ctggcaggcc tgtgctgcct ggtccctgtc tccctggctg aggatcccca gggagatgct
121 gcccagaaga cagatacatc ccaccatgat caggatcacc caaccttcaa caagatcacc
181 cccaacctgg ctgagttcgc cttcagccta taccgccagc tggcacacca gtccaacagc
241 accaatatct tcttctcccc agtgagcatc gctacagcct ttgcaatgct ctccctgggg
301 accaaggctg acactcacga tgaaatcctg gagggcctga atttcaacct cacggagatt
361 ccggaggctc agatccatga aggcttccag gaactcctcc gtaccctcaa ccagccagac
421 agccagctcc agctgaccac cggcaatggc ctgttcctca gcgagggcct gaagctagtg
481 gataagtttt tggaggatgt taaaaagttg taccactcag aagccttcac tgtcaacttc
541 ggggacaccg aagaggccaa gaaacagatc aacgattacg tggagaaggg tactcaaggg
601 aaaattgtgg atttggtcaa ggagcttgac agagacacag tttttgctct ggtgaattac
661 atcttcttta aaggcaaatg ggagagaccc tttgaagtca aggacaccga ggaagaggac
721 ttccacgtgg accaggcgac caccgtgaag gtgcctatga tgaagcgttt aggcatgttt
781 aacatccagc actgtaagaa gctgtccagc tgggtgctgc tgatgaaata cctgggcaat
841 gccaccgcca tcttcttcct gcctgatgag gggaaactac agcacctgga aaatgaactc
901 acccacgata tcatcaccaa gttcctggaa aatgaagaca gaaggtctgc cagcttacat
961 ttacccaaac tgtccattac tggaacctat gatctgaaga gcgtcctggg tcaactgggc
1021 atcactaagg tcttcagcaa tggggctgac ctctccgggg tcacagagga ggcacccctg
1081 aagctctcca aggccgtgca taaggctgtg ctgaccatcg acgagaaagg gactgaagct
1141 gctggggcca tgtttttaga ggccataccc atgtctatcc cccccgaggt caagttcaac
1201 aaaccctttg tcttcttaat gattgaacaa aataccaagt ctcccctctt catgggaaaa
1261 gtggtgaatc ccacccaaaa ataactgcct ctcgctcctc aacccctccc ctccatccct
1321 ggccccctcc ctggatgaca ttaaagaagg gttgagctgg tccctgcctg caaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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