LOCUS BC015628 1697 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens 4-aminobutyrate aminotransferase, mRNA (cDNA clone
MGC:23087 IMAGE:4844316), complete cds.
ACCESSION BC015628
VERSION BC015628.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1697)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015628.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679949.
FEATURES Location/Qualifiers
source 1..1697
/db_xref="H-InvDB:HIT000037226"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23087 IMAGE:4844316"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1697
/gene="ABAT"
/gene_synonym="GABA-AT"
/gene_synonym="GABAT"
/gene_synonym="NPD009"
/db_xref="GeneID:18"
/db_xref="HGNC:HGNC:23"
/db_xref="MIM:137150"
CDS 88..1590
/gene="ABAT"
/gene_synonym="GABA-AT"
/gene_synonym="GABAT"
/gene_synonym="NPD009"
/codon_start=1
/product="4-aminobutyrate aminotransferase"
/protein_id="AAH15628.1"
/db_xref="GeneID:18"
/db_xref="HGNC:HGNC:23"
/db_xref="MIM:137150"
/translation="MASMLLAQRLACSFQHSYRLLVPGSRHISQAAAKVDVEFDYDGP
LMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISS
VPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLIT
MACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFH
GRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDL
IVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGC
TGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLL
AEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIR
NKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADFK"
BASE COUNT 420 a 461 c 456 g 360 t
ORIGIN
1 ggaacccggc ggatcggatc ccgcagatcg gagacggggc ctggagggtg gcagcacgca
61 aagggtgtcc ctgtccctca aggggtcatg gcctccatgt tgctcgccca gcgcctggcc
121 tgcagcttcc agcacagcta ccgcctgctg gtgcctggat ccagacacat tagtcaagct
181 gcagccaaag tcgacgttga atttgattat gatgggcctc tgatgaagac ggaagtccca
241 gggcctagat ctcaggagtt aatgaaacag ctgaatataa ttcagaatgc agaggctgtg
301 cattttttct gcaattacga agagagccga ggcaattacc tggttgatgt ggacggcaac
361 cgaatgctgg atctttattc ccagatctcc tctgtcccca taggttacag ccaccccgcc
421 ctgctgaaac tcatccaaca gcctcaaaat gcgagcatgt ttgtcaacag acccgccctc
481 ggaatcctgc ctccggagaa ctttgtggag aagctccggc agtccttgct ctcggtggct
541 cccaaaggga tgtcccagct catcaccatg gcctgcggct cctgctccaa tgaaaacgcc
601 ttaaagacca tcttcatgtg gtaccggagc aaggaaagag ggcagagggg cttctcccag
661 gaggagctgg agacgtgcat gattaaccag gcccctggct gccccgacta cagcatcctc
721 tccttcatgg gcgcgttcca tgggaggacc atgggttgct tagcgaccac gcactctaaa
781 gccattcaca agatcgacat cccttccttt gactggccca tcgcaccgtt cccacggctg
841 aaataccctc tggaagagtt tgtgaaagag aaccaacagg aggaggcccg ctgtctggaa
901 gaggtggagg atctgattgt gaaatatcgg aaaaagaaga agacggtggc cgggatcatc
961 gtggagccca tccagtccga gggtggagac aaccacgcat ccgatgactt ctttcggaag
1021 ctgagagaca tcgccaggaa gcatggctgc gccttcttgg tggacgaggt ccagaccgga
1081 ggaggctgca cgggcaagtt ctgggcccat gagcactggg gcctggatga cccagcagac
1141 gtgatgacct tcagcaagaa gatgatgact gggggcttct tccacaagga ggagttcagg
1201 cctaatgctc cctaccggat cttcaacacc tggctggggg acccgtccaa gaacctgttg
1261 ctggctgagg tcatcaacat catcaagcgg gaggacctgc taaataatgc agcccatgcc
1321 gggaaggccc tgctcacagg actgctggac ctccaggccc ggtaccccca gttcatcagc
1381 agggtgagag gacgaggcac cttttgctcc ttcgatactc ccgatgattc catacggaat
1441 aagctcattt taattgccag aaacaaaggt gtggtgttgg gtggctgtgg tgacaaatcc
1501 attcgtttcc gtcccacgct ggtcttcagg gatcaccacg ctcacctgtt cctcaatatt
1561 ttcagtgaca tcttagcaga cttcaagtaa agaagccatt tccactacag tgagaaagcc
1621 cggatcccaa cagttgtcaa attgattagt ttgcctaatt catgttttca cttaaaagta
1681 aaaaaaaaaa aaaaaaa
//