LOCUS BC015541 3643 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family D (ALD), member 1,
mRNA (cDNA clone MGC:9595 IMAGE:3896490), complete cds.
ACCESSION BC015541
VERSION BC015541.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3643)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3643)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7262392.
FEATURES Location/Qualifiers
source 1..3643
/db_xref="H-InvDB:HIT000037176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9595 IMAGE:3896490"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3643
/gene="ABCD1"
/gene_synonym="ABC42"
/gene_synonym="ALDP"
/gene_synonym="AMN"
/db_xref="GeneID:215"
/db_xref="HGNC:HGNC:61"
/db_xref="MIM:300371"
CDS 381..2618
/gene="ABCD1"
/gene_synonym="ABC42"
/gene_synonym="ALDP"
/gene_synonym="AMN"
/codon_start=1
/product="ATP-binding cassette, sub-family D (ALD), member
1"
/protein_id="AAH15541.1"
/db_xref="GeneID:215"
/db_xref="HGNC:HGNC:61"
/db_xref="MIM:300371"
/translation="MPVLSRPRPWRGNTLKRTAVLLALAAYGAHKVYPLVRQCLAPAR
GLQAPAGEPTQEASGVAAAKAGMNRVFLQRLLWLLRLLFPRVLCRETGLLALHSAALV
SRTFLSVYVARLDGRLARCIVRKDPRAFGWQLLQWLLIALPATFVNSAIRYLEGQLAL
SFRSRLVAHAYRLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKP
LLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRK
GELRYMHSRVVANSEEIAFYGGHEVELALLQRSYQDLASQINLILLERLWYVMLEQFL
MKYVWSASGLLMVAVPIITATGYSESDAEAVKKAALEKKEEELVSERTEAFTIARNLL
TAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQRCHFKRPRELEDAQAGSGTI
GRSGVRVEGPLKIRGQVVDVEQGIICENIPIVTPSGEVVVASLNIRVEEGMHLLITGP
NGCGKSSLFRILGGLWPTYGGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSVEDM
QRKGYSEQDLEAILDVVHLHHILQREGGWEAMCDWKDVLSGGEKQRIGMARMFYHRPK
YALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKFE
KLDSAARLSLTEEKQRLEQQLAGIPKMQRRLQELCQILGEAVAPAHVPAPSPQGPGGL
QGAST"
BASE COUNT 667 a 1257 c 1128 g 591 t
ORIGIN
1 ggacgcgcct ggtgccccgg ggaggggcgc caccggggga ggaggaggag gagaaggtgg
61 agaggaagag acgccccctc tgcccgagac ctctcaaggc cctgacctca ggggccaggg
121 cactgacagg acaggagagc caagttcctc cacttgggct gcccgaagag gccgcgaccc
181 tggagggccc tgagcccacc gcaccagggg ccccagcacc accccggggg cctaaagcga
241 cagtctcagg ggccatcgca aggtttccag ttgcctagac aacaggccca gggtcagagc
301 aacaatcctt ccagccacct gcctcaactg ctgccccagg caccagcccc agtccctacg
361 cggcagccag cccaggtgac atgccggtgc tctccaggcc ccggccctgg cgggggaaca
421 cgctgaagcg cacggccgtg ctcctggccc tcgcggccta tggagcccac aaagtctacc
481 ccttggtgcg ccagtgcctg gccccggcca ggggtcttca ggcgcccgcc ggggagccca
541 cgcaggaggc ctccggggtc gcggcggcca aagctggcat gaaccgggta ttcctgcagc
601 ggctcctgtg gctcctgcgg ctgctgttcc cccgggtcct gtgccgggag acggggctgc
661 tggccctgca ctcggccgcc ttggtgagcc gcaccttcct gtcggtgtat gtggcccgcc
721 tggacggaag gctggcccgc tgcatcgtcc gcaaggaccc gcgggctttt ggctggcagc
781 tgctgcagtg gctcctcatc gccctccctg ctaccttcgt caacagtgcc atccgttacc
841 tggagggcca actggccctg tcgttccgca gccgtctggt ggcccacgcc taccgcctct
901 acttctccca gcagacctac taccgggtca gcaacatgga cgggcggctt cgcaaccctg
961 accagtctct gacggaggac gtggtggcct ttgcggcctc tgtggcccac ctctactcca
1021 acctgaccaa gccactcctg gacgtggctg tgacttccta caccctgctt cgggcggccc
1081 gctcccgtgg agccggcaca gcctggccct cggccatcgc cggcctcgtg gtgttcctca
1141 cggccaacgt gctgcgggcc ttctcgccca agttcgggga gctggtggca gaggaggcgc
1201 ggcggaaggg ggagctgcgc tacatgcact cgcgtgtggt ggccaactcg gaggagatcg
1261 ccttctatgg gggccatgag gtggagctgg ccctgctaca gcgctcctac caggacctgg
1321 cctcgcagat caacctcatc cttctggaac gcctgtggta tgttatgctg gagcagttcc
1381 tcatgaagta tgtgtggagc gcctcgggcc tgctcatggt ggctgtcccc atcatcactg
1441 ccactggcta ctcagagtca gatgcagagg ccgtgaagaa ggcagccttg gaaaagaagg
1501 aggaggagct ggtgagcgag cgcacagaag ccttcactat tgcccgcaac ctcctgacag
1561 cggctgcaga tgccattgag cggatcatgt cgtcgtacaa ggaggtgacg gagctggctg
1621 gctacacagc ccgggtgcac gagatgttcc aggtatttga agatgttcag cgctgtcact
1681 tcaagaggcc cagggagcta gaggacgctc aggcggggtc tgggaccata ggccggtctg
1741 gtgtccgtgt ggagggcccc ctgaagatcc gaggccaggt ggtggatgtg gaacagggga
1801 tcatctgcga gaacatcccc atcgtcacgc cctcaggaga ggtggtggtg gccagcctca
1861 acatcagggt ggaggaaggc atgcatctgc tcatcacagg ccccaatggc tgcggcaaga
1921 gctccctgtt ccggatcctg ggtgggctct ggcccacgta cggtggtgtg ctctacaagc
1981 ccccacccca gcgcatgttc tacatcccgc agaggcccta catgtctgtg ggctccctgc
2041 gtgaccaggt gatctacccg gactcagtgg aggacatgca aaggaagggc tactcggagc
2101 aggacctgga agccatcctg gacgtcgtgc acctgcacca catcctgcag cgggagggag
2161 gttgggaggc tatgtgtgac tggaaggacg tcctgtcggg tggcgagaag cagagaatcg
2221 gcatggcccg catgttctac cacaggccca agtacgccct cctggatgaa tgcaccagcg
2281 ccgtgagcat cgacgtggaa ggcaagatct tccaggcggc caaggacgcg ggcattgccc
2341 tgctctccat cacccaccgg ccctccctgt ggaaatacca cacacacttg ctacagttcg
2401 atggggaggg cggctggaag ttcgagaagc tggactcagc tgcccgcctg agcctgacgg
2461 aggagaagca gcggctggag cagcagctgg cgggcattcc caagatgcag cggcgcctcc
2521 aggagctctg ccagatcctg ggcgaggccg tggccccagc gcatgtgccg gcacctagcc
2581 cgcaaggccc tggtggcctc cagggtgcct ccacctgaca caaccgtccc cggcccctgc
2641 cccgccccca agctcggatc acatgaagga gacagcagca cccacccatg cacgcacccc
2701 gcccctgcat gcctggcccc tcctcctaga aaacccttcc cgccctcggg aaagtagatg
2761 tggagggtgg cgccctgcgt aaccctcgcc ctgtccctcc cactccctgg gggcgctgtt
2821 ccacagtgac tgggccctgt ccagggcagt gagtcctcta ctttgctccg tggaggaagc
2881 tggggtacaa ggggcccagt gctggccaca cagcagcgca gccgagcccc aggagcccgt
2941 caggccacag cccctggcac tgcaggtggc ctccctccag agactcgagt ccccatgatt
3001 ccctcctcgt cagtctctca aagaccccat ggtccatccc ctgagggtgg tcagccaagg
3061 ctcccgttcc gtgggatgcc ataaaagccg cccagtggga cccacagtca cacagagcgc
3121 ctcacctgca tcctctcccc cacaagagcc ccaaagatcc cacgggagag gggagaggga
3181 cgcacagcac tgcctgccaa gcgagaatgc aggccccgcc ccctcggccc ctcaccacct
3241 ctttctacag cctaatttat tggattccct attcgtagcc atctccgtgg ccaatgtgac
3301 taccgtgcca gcagcggggg cggcccagcc tctgagtccc gtggggcccc ggctcccacc
3361 ggtgccaaac ccagcccctg cggccgtcac cccgccagcc tacactgcca gccgccaccg
3421 gggcacacgg gcctctgctt gccagccagg agtgcggaca ccatgttccc agctcagtgc
3481 caaagagggg tcaccagggg gagctgtctg cggagccagc gcctgcccga gagagacccc
3541 accgccaccg tgtgcctttc ccgggccctc agccctcggg ccgggcacca cccccagtcc
3601 ccccagtaaa agcctccact ggcaaaaaaa aaaaaaaaaa aaa
//