LOCUS BC015528 1184 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, beta, mRNA (cDNA clone MGC:9440
IMAGE:3903794), complete cds.
ACCESSION BC015528
VERSION BC015528.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: h Column: 19.
FEATURES Location/Qualifiers
source 1..1184
/db_xref="H-InvDB:HIT000037167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9440 IMAGE:3903794"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1184
/gene="NFKBIB"
/gene_synonym="IKBB"
/gene_synonym="TRIP9"
/db_xref="GeneID:4793"
/db_xref="HGNC:HGNC:7798"
/db_xref="MIM:604495"
CDS 35..1105
/gene="NFKBIB"
/gene_synonym="IKBB"
/gene_synonym="TRIP9"
/codon_start=1
/product="nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, beta"
/protein_id="AAH15528.1"
/db_xref="GeneID:4793"
/db_xref="HGNC:HGNC:7798"
/db_xref="MIM:604495"
/translation="MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLGAELGPGL
SWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTALHLAA
ILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREAPDT
YLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIHK
DVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRT
PLGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGDEYDDIVVHSS
RSQTRLPPTPASKPLPDDPRPV"
BASE COUNT 241 a 384 c 365 g 194 t
ORIGIN
1 gcgactgcgg ggggcccctg aggcggcggg ggccatggct ggggtcgcgt gcttgggaaa
61 agctgccgac gcagatgaat ggtgcgacag cggcctgggc tccctgggtc cggacgcagc
121 ggcccccgga ggacctgggt tgggcgcgga gttgggcccg gggctgtcgt gggctcccct
181 cgtcttcggc tacgtcactg aggatgggga cacggcactg cacttggctg tgattcatca
241 gcatgaaccc ttcctggatt ttcttctagg cttctcggcc ggcactgagt acatggacct
301 gcagaatgac ctaggccaga cagccctgca cctggcagcc atcctggggg agacatccac
361 ggtggagaag ctgtacgcag caggcgccgg gctgtgtgtg gcggagcgta ggggccacac
421 ggcgctgcac ctggcctgcc gtgtgggggc acacgcctgt gcccgtgccc tgcttcagcc
481 ccgcccccgg cgccccaggg aagcccccga cacctacctc gctcagggcc ctgaccgtac
541 tcccgacacc aaccataccc ctgtcgcctt gtaccccgat tccgacttgg agaaggaaga
601 agaggagagt gaggaggact ggaagctgca gctggaggct gaaaactacg agggccacac
661 cccactccac gtggccgtta tccacaaaga tgtggagatg gtccggctgc tccgagatgc
721 tggagctgac cttgacaaac cggagcccac gtgcggccgg agcccccttc atttggcagt
781 ggaggcccag gcagccgatg tgctggagct tctcctgagg gcaggcgcga accctgctgc
841 ccgcatgtac ggtggccgca ccccactcgg cagtgccatg ctccggccca accccatcct
901 cgcccgcctc ctccgtgcac acggagcccc tgagcccgag ggcgaggacg agaaatccgg
961 cccctgcagc agcagtagcg acagcgacag cggagacgag ggcgatgaat acgacgacat
1021 tgtggttcac agcagccgca gccaaacccg gctgcctccc accccagcct caaaacctct
1081 tcctgacgac ccccgccccg tgtgatttgt ttcattgtta atataatttc cagtttaata
1141 aacaaaaccc tagttctgaa aaaaaaaaaa aaaaaaaaaa aaaa
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