LOCUS BC015511 1127 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interleukin 6 (interferon, beta 2), mRNA (cDNA clone
MGC:9215 IMAGE:3884652), complete cds.
ACCESSION BC015511
VERSION BC015511.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10834983.
FEATURES Location/Qualifiers
source 1..1127
/db_xref="H-InvDB:HIT000037154"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9215 IMAGE:3884652"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1127
/gene="IL6"
/gene_synonym="BSF2"
/gene_synonym="HGF"
/gene_synonym="HSF"
/gene_synonym="IL-6"
/db_xref="GeneID:3569"
/db_xref="HGNC:HGNC:6018"
/db_xref="MIM:147620"
CDS 50..688
/gene="IL6"
/gene_synonym="BSF2"
/gene_synonym="HGF"
/gene_synonym="HSF"
/gene_synonym="IL-6"
/codon_start=1
/product="interleukin 6 (interferon, beta 2)"
/protein_id="AAH15511.1"
/db_xref="GeneID:3569"
/db_xref="HGNC:HGNC:6018"
/db_xref="MIM:147620"
/translation="MNSFSTSAFGPVAFSLGLLLVLPAAFPAPVPPGEDSKDVAAPHR
QPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCF
QSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKN
LDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM"
BASE COUNT 353 a 242 c 229 g 303 t
ORIGIN
1 cccaccggga acgaaagaga agctctatct cccctccagg agcccagcta tgaactcctt
61 ctccacaagc gccttcggtc cagttgcctt ctccctgggg ctgctcctgg tgttgcctgc
121 tgccttccct gccccagtac ccccaggaga agattccaaa gatgtagccg ccccacacag
181 acagccactc acctcttcag aacgaattga caaacaaatt cggtacatcc tcgacggcat
241 ctcagccctg agaaaggaga catgtaacaa gagtaacatg tgtgaaagca gcaaagaggc
301 actggcagaa aacaacctga accttccaaa gatggctgaa aaagatggat gcttccaatc
361 tggattcaat gaggagactt gcctggtgaa aatcatcact ggtcttttgg agtttgaggt
421 atacctagag tacctccaga acagatttga gagtagtgag gaacaagcca gagctgtgca
481 gatgagtaca aaagtcctga tccagttcct gcagaaaaag gcaaagaatc tagatgcaat
541 aaccacccct gacccaacca caaatgccag cctgctgacg aagctgcagg cacagaacca
601 gtggctgcag gacatgacaa ctcatctcat tctgcgcagc tttaaggagt tcctgcagtc
661 cagcctgagg gctcttcggc aaatgtagca tgggcacctc agattgttgt tgttaatggg
721 cattccttct tctggtcaga aacctgtcca ctgggcacag aacttatgtt gttctctatg
781 gagaactaaa agtatgagcg ttaggacact attttaatta tttttaattt attaatattt
841 aaatatgtga agctgagtta atttatgtaa gtcatattta tatttttaag aagtaccact
901 tgaaacattt tatgtattag ttttgaaata ataatggaaa gtggctatgc agtttgaata
961 tcctttgttt cagagccaga tcatttcttg gaaagtgtag gcttacctca aataaatggc
1021 taacttatac atatttttaa agaaatattt atattgtatt tatataatgt ataaatggtt
1081 tttataccaa taaatggcat tttaaaaaat tcaaaaaaaa aaaaaaa
//