LOCUS BC015499 410 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens family with sequence similarity 50, member A, mRNA
(cDNA clone IMAGE:3848922), partial cds.
ACCESSION BC015499
VERSION BC015499.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 410)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 410)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015499.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: k Column: 8.
FEATURES Location/Qualifiers
source 1..410
/db_xref="H-InvDB:HIT000088718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3848922"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..410
/gene="FAM50A"
/gene_synonym="9F"
/gene_synonym="DXS9928E"
/gene_synonym="HXC-26"
/gene_synonym="XAP5"
/db_xref="GeneID:9130"
/db_xref="MIM:300453"
CDS <1..191
/gene="FAM50A"
/gene_synonym="9F"
/gene_synonym="DXS9928E"
/gene_synonym="HXC-26"
/gene_synonym="XAP5"
/codon_start=3
/product="FAM50A protein"
/protein_id="AAH15499.1"
/db_xref="GeneID:9130"
/db_xref="MIM:300453"
/translation="PLFNFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPA
SRWEPYDPEKKWDKYTIR"
BASE COUNT 102 a 118 c 114 g 76 t
ORIGIN
1 gaccactctt caactttgat gttcatgacg atgtgcggtt gctcagtgac gccactgtgg
61 agaaggatga gtcccatgca ggcaaggtgg tgctgaggag ctggtacgag aagaacaagc
121 acatctttcc cgccagccgc tgggaaccct acgaccctga aaagaagtgg gacaagtaca
181 cgatccgctg agcatccagg aggctgcgcg gccccggctc ctcagctccc tcagtgtgcc
241 ccgtggtgtc accgggactc caggcacccg ctcccctgcg accatgccag gcacgctggg
301 aggaggacgg cagctgctcg tgtcctgccc ctgccacatc agtgactgct ttattctttt
361 ccaataaaga agtgcacgtg tcagagctgg aaaaaaaaaa aaaaaaaaaa
//