LOCUS BC015490 1319 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldo-keto reductase family 1, member C1 (dihydrodiol
dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase),
mRNA (cDNA clone MGC:8954 IMAGE:3877178), complete cds.
ACCESSION BC015490
VERSION BC015490.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1319)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1319)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015490.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56121816.
FEATURES Location/Qualifiers
source 1..1319
/db_xref="H-InvDB:HIT000037139"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8954 IMAGE:3877178"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1319
/gene="AKR1C1"
/gene_synonym="2-ALPHA-HSD"
/gene_synonym="20-ALPHA-HSD"
/gene_synonym="C9"
/gene_synonym="DD1"
/gene_synonym="DDH"
/gene_synonym="H-37"
/gene_synonym="HAKRC"
/gene_synonym="MBAB"
/gene_synonym="MGC8954"
/db_xref="GeneID:1645"
/db_xref="HGNC:HGNC:384"
/db_xref="MIM:600449"
CDS 18..989
/gene="AKR1C1"
/gene_synonym="2-ALPHA-HSD"
/gene_synonym="20-ALPHA-HSD"
/gene_synonym="C9"
/gene_synonym="DD1"
/gene_synonym="DDH"
/gene_synonym="H-37"
/gene_synonym="HAKRC"
/gene_synonym="MBAB"
/gene_synonym="MGC8954"
/codon_start=1
/product="aldo-keto reductase family 1, member C1
(dihydrodiol dehydrogenase 1; 20-alpha
(3-alpha)-hydroxysteroid dehydrogenase)"
/protein_id="AAH15490.1"
/db_xref="GeneID:1645"
/db_xref="HGNC:HGNC:384"
/db_xref="MIM:600449"
/translation="MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEA
GFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERS
LKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLA
KSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSA
LGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQR
IRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY"
BASE COUNT 448 a 272 c 299 g 300 t
ORIGIN
1 cccacgcgtc cgcagaaatg gattcgaaat atcagtgtgt gaagctgaat gatggtcact
61 tcatgcctgt cctgggattt ggcacctatg cgcctgcaga ggttcctaaa agtaaagctt
121 tagaggccac caaattggca attgaagctg gcttccgcca tattgattct gctcatttat
181 acaataatga ggagcaggtt ggactggcca tccgaagcaa gattgcagat ggcagtgtga
241 agagagaaga catattctac acttcaaagc tttggtgcaa ttcccatcga ccagagttgg
301 tccgaccagc cttggaaagg tcactgaaaa atcttcaatt ggattatgtt gacctctacc
361 ttattcattt tccagtgtct gtaaagccag gtgaggaagt gatcccaaaa gatgaaaatg
421 gaaaaatact atttgacaca gtggatctct gtgccacgtg ggaggccgtg gagaagtgta
481 aagatgcagg attggccaag tccatcgggg tgtccaactt caaccgcagg cagctggaga
541 tgatcctcaa caagccaggg ctcaagtaca agcctgtctg caaccaggtg gaatgtcatc
601 cttacttcaa ccagagaaaa ctgctggatt tctgcaagtc aaaagacatt gttctggttg
661 cctatagtgc tctgggatcc caccgagaag aaccatgggt ggacccgaac tccccggtgc
721 tcttggagga cccagtcctt tgtgccttgg caaaaaagca caagcgaacc ccagccctga
781 ttgccctgcg ctaccagcta cagcgtgggg ttgtggtcct ggccaagagc tacaatgagc
841 agcgcatcag acagaacgtg caggtgtttg aattccagtt gacttcagag gagatgaaag
901 ccatagatgg cctaaacaga aatgtgcgat atttgaccct tgatattttt gctggccccc
961 ctaattatcc attttctgat gaatattaac atggagggca ttgcatgagg tctgccagaa
1021 ggccctgcgt gtggatggtg acacagagga tggctctatg ctggtgactg gacacatcgc
1081 ctctggttaa atctctcctg cttggtgatt tcagcaagct acagcaaagc ccattggcca
1141 gaaaggaaag acaataattt tgttttttca ttttgaaaaa attaaatgct ctctcctaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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