LOCUS BC015419 1649 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 96, mRNA (cDNA clone
MGC:21987 IMAGE:4396825), complete cds.
ACCESSION BC015419
VERSION BC015419.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: d Column: 23.
FEATURES Location/Qualifiers
source 1..1649
/db_xref="H-InvDB:HIT000037118"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21987 IMAGE:4396825"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1649
/gene="C1orf96"
/gene_synonym="FLJ41471"
/gene_synonym="RP4-803J11.3"
/db_xref="GeneID:126731"
/db_xref="HGNC:HGNC:29578"
CDS 53..865
/gene="C1orf96"
/gene_synonym="FLJ41471"
/gene_synonym="RP4-803J11.3"
/codon_start=1
/product="chromosome 1 open reading frame 96"
/protein_id="AAH15419.1"
/db_xref="GeneID:126731"
/db_xref="HGNC:HGNC:29578"
/translation="MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAH
APWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPE
EQDAEAGDAEAEDAEDAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFA
RGNRKAVKSPQRSSSKIKENKHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESAL
RAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSSENPWMTEYMRCYSARA"
BASE COUNT 487 a 363 c 422 g 377 t
ORIGIN
1 gtaggctgcg ggcagcgagg agcggctggc gctcgaggcg gcggacgtca ccatgtcccc
61 ggggagcggg gtgaagagcg agtacatgaa gcgctaccag gagccgcgct gggaggagta
121 cgggccgtgc taccgcgagc tgctgcacta ccgcctaggc cgccggctgc tggagcaggc
181 gcacgcgccc tggctctggg acgactgggg cccggccggc tcctcggagg actcggcgtc
241 gtcagagtcg tcgggcgccg ggggccccgc accccggtgc gccccgccct cgcccccgcc
301 gcccgtagag ccggcgaccc aggaggaggc ggaacggcgg gcgcgcgggg ccccggagga
361 gcaggacgcg gaggccgggg acgcggaggc cgaggacgcg gaggacgcgg ctctgccagc
421 actgccagtg aaagatgtag aagataaacc tgaacaacaa accagaacaa gagagactga
481 caaatcaccc accagtactg agcctcgaca gcaaccaagt gccttatttg ctagaggaaa
541 caggaaagcg gtcaaaagtc cccaaagatc atcgagtaaa ataaaagaaa acaagcatcc
601 atttgctctt tatggctggg gagaaaaaca gaccgataca ggaagccaga agactcacaa
661 cgtctgtgcg tccgctcctg tgcacgagat tcatgaatca gcattacgag ccaagaacag
721 aagacaggtg gaaaaaagga aactggttgc tcaaaggcag cgagctcact ctgtggatgt
781 ggagaagaac agaaagatga aggcttcctc ctcagagaac ccgtggatga cagaatacat
841 gaggtgctat tcggcaagag cttaaagaaa cacttgcgtg gacagcctct tttaaaaagt
901 gtaaatgact gaaaggaaaa acaaaacaaa aaccatcaaa agaaacggac acaggtttaa
961 gaaaccaact gattatgcaa ggtttttttt agggaatttg taaaagattg ttttattttg
1021 atgaatattg gtcacctacc tcggcagtag ggcagacagt tgaagccata gacatttggt
1081 tatttatgaa gataattccc taaatctttg atattcttat aaggtttttg ttttaaagca
1141 tcttaatctt ttaagatact gacaccaaat gcctttaaat ggcaacagat gcttacagtt
1201 cagtattctt ttcataagct taggtagagc ctattatcat cttgttctaa ataactttcc
1261 agattccata gctataagat cattccatcc tacagcataa gactcgtttt ccttatatgc
1321 cgttttgttt gtgaaagaat atcaagtcaa aaatgagtgt cagcactact actgattcca
1381 tgtataatga aagtagaact ttgctagttc ctgaaaattt ttaacttatt tgtatttcag
1441 ttcagcagca tctttatgta gattgtgata tttaagaatt atctgggctg ggcgagggtc
1501 tctttttctc tttcagtgat catctaggca gttattattt aatagtttaa tagctcaagt
1561 acattccaat agacgaagtg cacacaacac aatatgtgtg tacagtagta gtaaagtttc
1621 ttttgagtag tcaaaaaaaa aaaaaaaaa
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