LOCUS BC015403 1593 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens tropomyosin 3, mRNA (cDNA clone MGC:21936
IMAGE:4389911), complete cds.
ACCESSION BC015403
VERSION BC015403.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1593)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1593)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1593
/db_xref="H-InvDB:HIT000037111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21936 IMAGE:4389911"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1593
/gene="TPM3"
/gene_synonym="hscp30"
/gene_synonym="MGC14582"
/gene_synonym="MGC3261"
/gene_synonym="OK/SW-cl.5"
/gene_synonym="TM-5"
/gene_synonym="TM3"
/gene_synonym="TM30"
/gene_synonym="TM30nm"
/gene_synonym="TPMsk3"
/gene_synonym="TRK"
/db_xref="GeneID:7170"
/db_xref="HGNC:HGNC:12012"
/db_xref="MIM:191030"
CDS 46..792
/gene="TPM3"
/gene_synonym="hscp30"
/gene_synonym="MGC14582"
/gene_synonym="MGC3261"
/gene_synonym="OK/SW-cl.5"
/gene_synonym="TM-5"
/gene_synonym="TM3"
/gene_synonym="TM30"
/gene_synonym="TM30nm"
/gene_synonym="TPMsk3"
/gene_synonym="TRK"
/codon_start=1
/product="tropomyosin 3"
/protein_id="AAH15403.1"
/db_xref="GeneID:7170"
/db_xref="HGNC:HGNC:12012"
/db_xref="MIM:191030"
/translation="MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQ
AEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDE
EKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQ
IRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTID
DLEDKLKCTKEEHLCTQRMLDQTLLDLNEM"
BASE COUNT 474 a 351 c 405 g 363 t
ORIGIN
1 ggaggaggca ggaaccggag cgcgagcagt agctgggtgg gcaccatggc tgggatcacc
61 accatcgagg cggtgaagcg caagatccag gttctgcagc agcaggcaga tgatgcagag
121 gagcgagctg agcgcctcca gcgagaagtt gagggagaaa ggcgggcccg ggaacaggct
181 gaggctgagg tggcctcctt gaaccgtagg atccagctgg ttgaagaaga gctggaccgt
241 gctcaggagc gcctggccac tgccctgcaa aagctggaag aagctgaaaa agctgctgat
301 gagagtgaga gaggtatgaa ggttattgaa aaccgggcct taaaagatga agaaaagatg
361 gaactccagg aaatccaact caaagaagct aagcacattg cagaagaggc agataggaag
421 tatgaagagg tggctcgtaa gttggtgatc attgaaggag acttggaacg cacagaggaa
481 cgagctgagc tggcagagtc ccgttgccga gagatggatg agcagattag actgatggac
541 cagaacctga agtgtctgag tgctgctgaa gaaaagtact ctcaaaaaga agataaatat
601 gaggaagaaa tcaagattct tactgataaa ctcaaggagg cagagacccg tgctgagttt
661 gctgagagat cggtagccaa gctggaaaag acaattgatg acctggaaga taaactgaaa
721 tgcaccaaag aggagcacct ctgtacacaa aggatgctgg accagaccct gcttgacctg
781 aatgagatgt agaacgcccc agtcccaccc tgctgctgct cctccctctg acccagactc
841 cgcctgaggc cagcctgcgg gaagctgacc tttaactgag ggctgatctt taactggaag
901 gctgctttct cctttcacca ccccctcctt ccctgtgtct ttttcgccaa actgtctctg
961 cctcttcccg gagaatccag ctgggctaga ggctgagcac ctttggaaac aacatttaag
1021 ggaatgtgag cacaatgcat aatgtcttta aaaagcatgt tgtgatgtac acattttgta
1081 attacctttt ttgttgtttt gtagcaacca tttgtaaaac attccaaata attccacagt
1141 cctgaagcag caatcgaatc cctttctcac ttttggaagg tgacttttca ccttaatgca
1201 tattcccctc tccatagagg agaggaaaag gtgtaggcct gccttaccga gagccaaaca
1261 gagcccaggg agactcagct gtgggaaacc tcattgttct gtacaaagta ctagctaaac
1321 cagaaaggtg attccaggag gagttagcca aacaacaaca aaaacaaaaa atgtgctgtt
1381 caagttttca gctttaagat atctttggat aatgttattt ctatttttta tttttttcat
1441 tagaagttac caaattaaga tggtaagacc tctgagacca aaattttgtc ccatctctac
1501 cccctcacaa ctgcttacag aatggatcat gtccccctta tgttgaggtg accacttaat
1561 tgctttcctg cctccttgaa aaaaaaaaaa aaa
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