LOCUS BC015358 1415 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens HIV-1 Tat interactive protein 2, 30kDa, mRNA (cDNA
clone MGC:21465 IMAGE:3455757), complete cds.
ACCESSION BC015358
VERSION BC015358.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1415)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015358.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: b Column: 19.
FEATURES Location/Qualifiers
source 1..1415
/db_xref="H-InvDB:HIT000037095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21465 IMAGE:3455757"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1415
/gene="HTATIP2"
/gene_synonym="CC3"
/gene_synonym="TIP30"
/db_xref="GeneID:10553"
/db_xref="MIM:605628"
CDS 78..806
/gene="HTATIP2"
/gene_synonym="CC3"
/gene_synonym="TIP30"
/codon_start=1
/product="HTATIP2 protein"
/protein_id="AAH15358.1"
/db_xref="GeneID:10553"
/db_xref="MIM:605628"
/translation="MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLF
SKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAE
GFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFD
RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWARGHSVPVVTVVRAMLNNVVRPR
DKQMELLENKAIHDLGKAHGSLKP"
misc_feature 138..656
/gene="HTATIP2"
/gene_synonym="CC3"
/gene_synonym="TIP30"
/note="COG0702; Region: Predicted
nucleoside-diphosphate-sugar epimerases [Cell envelope
biogenesis, outer membrane / Carbohydrate transport and
metabolism]"
/db_xref="CDD:COG0702"
BASE COUNT 418 a 277 c 343 g 377 t
ORIGIN
1 cggacgcgtg ggcgggataa ggactggcag tcccctgaca ccctaagacc ggcatctgtc
61 gatgttattt ccccagcatg gccgaaacag aagccctgtc gaagcttcgg gaagacttca
121 ggatgcagaa taaatccgtc tttattttgg gcgccagcgg agaaaccggc agagtgctct
181 taaaggaaat cctggagcag ggcctgtttt ccaaagtcac gctcattggc cggaggaagc
241 tcaccttcga cgaggaagct tataaaaatg tgaatcaaga agtggtggac tttgaaaagt
301 tggatgacta cgcctctgcc tttcaaggtc atgatgttgg attctgttgc ctgggtacca
361 ccagagggaa agctggggcg gagggatttg ttcgtgttga ccgagattat gtgctgaagt
421 ctgcagagct ggcaaaagct ggagggtgca aacatttcaa cttgctatcc tctaaaggag
481 ctgataaatc aagcaatttt ttatatctac aagttaaggg agaagtagaa gccaaggttg
541 aagaattaaa atttgatcgt tactctgtat ttaggcctgg agttctgtta tgtgataggc
601 aagaatctcg cccaggtgaa tggctggtta gaaagttctt tggctcctta ccagactctt
661 gggccagggg gcattctgtg cctgtggtga ccgtggttag agcaatgctg aacaatgtgg
721 tgagaccaag agacaagcag atggaactgc tggagaacaa ggccatccat gacctgggga
781 aagcgcatgg ctctctcaag ccatgaccac actggagaaa tggtttttat tgtcaacctt
841 aacacccatc accaaatcgg taatttcagg gtctaaaaaa agtcagcatg ttttaacttt
901 gttgttttac tatcctcagg catccattcc aatcaagaaa tgatggtgct ctgcatcagt
961 ggttcagagc ctggttatac atatagatca ctcagggagc tttggaaaaa taaagatttg
1021 tcagccctat ctcaaacttg aatcaaaatt tctggggtgt gggcacaata atctgtaatt
1081 ttctttgttt atacttcccc tgatgccact ggttccgatg ccactggctg gggggcctgc
1141 tttgaaatgc ttgtctgcag agtcacagca gccatgaaaa ccttatgacc gtgcaaatga
1201 gctctgctct aaaattgttg acattcatgt ctctgagtta caaaagtgct aattcactac
1261 atgtaattgt gtaagtaaac attgtgcctt tactacttct ttatgtaata gaagttatat
1321 acctaagctt atataataca tggggaggat taaataaagg aataaagatg aatggacaac
1381 tcctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//