LOCUS BC015345 837 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homeobox B7, mRNA (cDNA clone MGC:21362
IMAGE:4413080), complete cds.
ACCESSION BC015345
VERSION BC015345.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25121962.
FEATURES Location/Qualifiers
source 1..837
/db_xref="H-InvDB:HIT000037087"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21362 IMAGE:4413080"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..837
/gene="HOXB7"
/gene_synonym="HHO.C1"
/gene_synonym="Hox-2.3"
/db_xref="GeneID:3217"
/db_xref="HGNC:HGNC:5118"
/db_xref="MIM:142962"
CDS 51..704
/gene="HOXB7"
/gene_synonym="HHO.C1"
/gene_synonym="Hox-2.3"
/codon_start=1
/product="homeobox B7"
/protein_id="AAH15345.1"
/db_xref="GeneID:3217"
/db_xref="HGNC:HGNC:5118"
/db_xref="MIM:142962"
/translation="MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQRPGYG
AGSGASFAASMQGLYPGGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPG
DSAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNR
YLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE"
BASE COUNT 232 a 225 c 248 g 132 t
ORIGIN
1 cgtaaaaccg acactaaaac gtccctgcct acaaatcatc cggccaaatt atgagttcat
61 tgtattatgc gaatgcttta ttttctaaat atccagcctc aagttcggtt ttcgctaccg
121 gagccttccc agaacaaact tcttgtgcgt ttgcttccaa cccccagcgc ccgggctatg
181 gagcgggttc gggcgcttcc ttcgccgcct cgatgcaggg cttgtacccc ggcggggggg
241 gcatggcggg ccagagcgcg gccggcgtct acgcggccgg ctatgggctc gagccgagtt
301 ccttcaacat gcactgcgcg ccctttgagc agaacctctc cggggtgtgt cccggcgact
361 ccgccaaggc ggcgggcgcc aaggagcaga gggactcgga cttggcggcc gagagtaact
421 tccggatcta cccctggatg cgaagctcag gaactgaccg caaacgaggc cgccagacct
481 acacccgcta ccagaccctg gagctggaga aagaatttca ctacaatcgc tacctgacgc
541 ggcggcggcg catcgagatc gcgcacacgc tctgcctcac ggaaagacag atcaagattt
601 ggtttcagaa ccggcgcatg aagtggaaaa aggagaacaa gaccgcgggc ccggggacca
661 ccggccaaga cagggctgaa gcagaggagg aagaggaaga gtgagggatg gagaaagggc
721 agaggaagag acatgagaaa gggagaggaa gagaagccca gctctgggaa ctgaatcagg
781 aaactcaaat cgaataggga agtaaaaaaa caaaacaaaa aacaaaaaaa aaaaaaa
//