LOCUS BC015337 1870 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 4, mRNA (cDNA clone
MGC:21272 IMAGE:4431534), complete cds.
ACCESSION BC015337
VERSION BC015337.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1870)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1870)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777651.
FEATURES Location/Qualifiers
source 1..1870
/db_xref="H-InvDB:HIT000037084"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21272 IMAGE:4431534"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1870
/gene="KCNN4"
/gene_synonym="hIKCa1"
/gene_synonym="hKCa4"
/gene_synonym="hSK4"
/gene_synonym="IK1"
/gene_synonym="IKCA1"
/gene_synonym="KCa3.1"
/gene_synonym="KCA4"
/gene_synonym="SK4"
/db_xref="GeneID:3783"
/db_xref="HGNC:HGNC:6293"
/db_xref="MIM:602754"
CDS 10..1293
/gene="KCNN4"
/gene_synonym="hIKCa1"
/gene_synonym="hKCa4"
/gene_synonym="hSK4"
/gene_synonym="IK1"
/gene_synonym="IKCA1"
/gene_synonym="KCa3.1"
/gene_synonym="KCA4"
/gene_synonym="SK4"
/codon_start=1
/product="potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 4"
/protein_id="AAH15337.1"
/db_xref="GeneID:3783"
/db_xref="HGNC:HGNC:6293"
/db_xref="MIM:602754"
/translation="MGGDLVLGLGALRRRKRLLEQEKSLAGWALVLAGTGIGLMVLHA
EMLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFHAKEVQLFMTDNGLRDWRVALTG
RQAAQIVLELVVCGLHPAPVRGPPCVQDLGAPLTSPQPWPGFLGQGEALLSLAMLLRL
YLVPRAVLLRSGVLLNASYRSIGALNQVRFRHWFVAKLYMNTHPGRLLLGLTLGLWLT
TAWVLSVAERQAVNATGHLSDTLWLIPITFLTIGYGDVVPGTMWGKIVCLCTGVMGVC
CTALLVAVVARKLEFNKAEKHVHNFMMDIQYTKEMKESAARVLQEAWMFYKHTRRKES
HAARRHQRKLLAAINAFRQVRLKHRKLREQVNSMVDISKMHMILYDLQQNLSSSHRAL
EKQIDTLAGKLDALTELLSTALGPRQLPEPSQQSK"
BASE COUNT 374 a 541 c 591 g 364 t
ORIGIN
1 ccgggggcca tgggcgggga tctggtgctt ggcctggggg ccttgagacg ccgaaagcgc
61 ttgctggagc aggagaagtc tctggccggc tgggcactgg tgctggcagg aactggcatt
121 ggactcatgg tgctgcatgc agagatgctg tggttcgggg ggtgctcgtg ggcgctctac
181 ctgttcctgg ttaaatgcac gatcagcatt tccaccttct tactcctctg cctcatcgtg
241 gcctttcatg ccaaagaggt ccagctgttc atgaccgaca acgggctgcg ggactggcgc
301 gtggcgctga ccgggcggca ggcggcgcag atcgtgctgg agctggtggt gtgtgggctg
361 cacccggcgc ccgtgcgggg cccgccgtgc gtgcaggatt taggggcgcc gctgacctcc
421 ccgcagccct ggccgggatt cctgggccaa ggggaagcgc tgctgtccct ggccatgctg
481 ctgcgtctct acctggtgcc ccgcgccgtg ctcctgcgca gcggcgtcct gctcaacgct
541 tcctaccgca gcatcggcgc tctcaatcaa gtccgcttcc gccactggtt cgtggccaag
601 ctttacatga acacgcaccc tggccgcctg ctgctcggcc tcacgcttgg cctctggctg
661 accaccgcct gggtgctgtc cgtggccgag aggcaggctg ttaatgccac tgggcacctt
721 tcagacacac tttggctgat ccccatcaca ttcctgacca tcggctatgg tgacgtggtg
781 ccgggcacca tgtggggcaa gatcgtctgc ctgtgcactg gagtcatggg tgtctgctgc
841 acagccctgc tggtggccgt ggtggcccgg aagctggagt ttaacaaggc agagaagcac
901 gtgcacaact tcatgatgga tatccagtat accaaagaga tgaaggagtc cgctgcccga
961 gtgctacaag aagcctggat gttctacaaa catactcgca ggaaggagtc tcatgctgcc
1021 cgcaggcatc agcgcaagct gctggccgcc atcaacgcgt tccgccaggt gcggctgaaa
1081 caccggaagc tccgggaaca agtgaactcc atggtggaca tctccaagat gcacatgatc
1141 ctgtatgacc tgcagcagaa tctgagcagc tcacaccggg ccctggagaa acagattgac
1201 acgctggcgg ggaagctgga tgccctgact gagctgctta gcactgccct ggggccgagg
1261 cagcttccag aacccagcca gcagtccaag tagctggacc cacgaggagg aaccaggcta
1321 ctttccccag tactgaggtg gtggacatcg tctctgccac tcctgaccca gccctgaaca
1381 aagcacctca agtgcaagga ccaaaggggg ccctggcttg gagtgggttg gcttgctgat
1441 ggctgctgga ggggacgctg gctaaagtgg gtaggccttg gcccacctga ggccccaggt
1501 gggaacatgg tcacccccac tctgcatacc ctcatcaaaa acactctcac tatgctgcta
1561 tggacgacct ccagctctca gttacaagtg caggcgactg gaggcaggac tcctgggtcc
1621 ctgggaaaga gggtactagg ggcccggatc caggattctg ggaggcttca gttaccgctg
1681 gccgagctga agaactgggt atgaggctgg ggcggggctg gaggtggcgc cccctggtgg
1741 gacaacaaag aggacaccat ttttccagag ctgcagagag cacctggtgg ggaggaagaa
1801 gtgtaactca ccagcctctg ctcttatctt tgtaataaat gttaaagcca aaaaaaaaaa
1861 aaaaaaaaaa
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