LOCUS BC014981 2135 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens glycerophosphodiester phosphodiesterase 1, mRNA (cDNA
clone MGC:23190 IMAGE:4855079), complete cds.
ACCESSION BC014981
VERSION BC014981.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2135)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: d Column: 16.
FEATURES Location/Qualifiers
source 1..2135
/db_xref="H-InvDB:HIT000036941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23190 IMAGE:4855079"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2135
/gene="GDE1"
/gene_synonym="363E6.2"
/gene_synonym="MIR16"
/db_xref="GeneID:51573"
/db_xref="HGNC:HGNC:29644"
/db_xref="MIM:605943"
CDS 56..1051
/gene="GDE1"
/gene_synonym="363E6.2"
/gene_synonym="MIR16"
/codon_start=1
/product="glycerophosphodiester phosphodiesterase 1"
/protein_id="AAH14981.1"
/db_xref="GeneID:51573"
/db_xref="HGNC:HGNC:29644"
/db_xref="MIM:605943"
/translation="MWLWEDQGGLLGPFSFLLLVLLLVTRSPVNACLLTGSLFVLLRV
FSFEPVPSCRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEF
TSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREA
VAECLNHNLTIFFDVKGHAHKATEALKKMYMEFPQLYNNSVVCSFLPEVIYKMRQTDR
DVITALTHRPWSLSHTGDGKPRYDTFWKHFIFVMMDILLDWSMHNILWYLCGISAFLM
QKDFVSPAYLKKWSAKGIQVVGWTVNTFDEKSYYESHLGSSYITDSMVEDCEPHF"
BASE COUNT 601 a 495 c 529 g 510 t
ORIGIN
1 gccccaggag cccggcgggt ccgggactcc cgtccgtgcc ggtgcgggcg ccggcatgtg
61 gctgtgggag gaccagggcg gcctcctggg ccctttctcc ttcctgctgc tagtgctgct
121 gctggtgacg cggagcccgg tcaatgcctg cctcctcacc ggcagcctct tcgttctact
181 gcgcgtcttc agctttgagc cggtgccctc ttgcagggcc ctgcaggtgc tcaagccccg
241 ggaccgcatt tctgccatcg cccaccgtgg cggcagccac gacgcgcccg agaacacgct
301 ggcggccatt cggcaggcag ctaagaatgg agcaacaggc gtggagttgg acattgagtt
361 tacttctgac gggattcctg tcttaatgca cgataacaca gtagatagga cgactgatgg
421 gactgggcga ttgtgtgatt tgacatttga acaaattagg aagctgaatc ctgcagcaaa
481 ccacagactc aggaatgatt tccctgatga aaagatccct accctaaggg aagctgttgc
541 agagtgccta aaccataacc tcacaatctt ctttgatgtc aaaggccatg cacacaaggc
601 tactgaggct ctaaagaaaa tgtatatgga atttcctcaa ctgtataata atagtgtggt
661 ctgttctttc ttgccagaag ttatctacaa gatgagacaa acagatcggg atgtaataac
721 agcattaact cacagacctt ggagcctaag ccatacagga gatgggaaac cacgctatga
781 tactttctgg aaacatttta tatttgttat gatggacatt ttgctcgatt ggagcatgca
841 taatatcttg tggtacctgt gtggaatttc agctttcctc atgcaaaagg attttgtatc
901 cccggcctac ttgaagaagt ggtcagctaa aggaatccag gttgttggtt ggactgttaa
961 tacctttgat gaaaagagtt actacgaatc ccatcttggt tccagctata tcactgacag
1021 catggtagaa gactgcgaac ctcacttcta gactttcacg gtgggacgaa acgggttcag
1081 aaactgccag gggcctcata cagggatatc aaaataccct ttgtgctagc ccaggccctg
1141 gggaatcagg tgactcacac aaatgcaata gttggtcact gcatttttac ctgaaccaaa
1201 gctaaacccg gtgttgccac catgcaccat ggcatgccag agttcaacac tgttgctctt
1261 gaaaatctgg gtctgaaaaa acgcacaaga gcccctgccc tgccctagct gaggcacaca
1321 gggagaccca gtgaggataa gcacagattg aattgtacaa tttgcagatg cagatgtaaa
1381 tgcatgggac atgcatgata actcagagtt gacattttaa aacttgccac acttatttca
1441 aatatttgta ctcagctatg ttaacatgta ctgtagacat caaacttgtg gccatactaa
1501 taaaattatt aaaaggagca ctaaaggaaa actgtgtgcc aagcatcata tcctaaggca
1561 tacggaattt ggggaagcca ccatgcaatc cagtgaggct tcagtgtaca gcaaccaaaa
1621 tggtagggag gtcttgaagc caatgaggga tttatagcat cttgaataga gagctgcaaa
1681 ccaccagggg gcagagttgc acttttccag gctttttagg aagctctgca acagatgtga
1741 tctgatcata ggcaattaga actggaagaa acttccaaaa atatctaggt ttgtcctcat
1801 tttacaaatg aggaaactaa actctgtgga agggaagggg ttgcctcaaa agtcacagct
1861 tagctgggca cagtggctca tgccgataat cccagcaatt cagaaagctg aggcaggagg
1921 attacttgag gccagactgg gcaatatagc aagaccccat ctctaaaaaa ttaggcatgg
1981 tggtgcatgc ctgtattccc agctactcag gaggttgagg tgggaggatc acttgagccc
2041 agaagttcaa ggctgcaatg agccatgatt acaccacggc actacaacct tggtggcaca
2101 gtgagaacct gactcttaaa aaaaaaaaaa aaaaa
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