LOCUS BC014946 2670 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast)-like, mRNA (cDNA clone MGC:22951 IMAGE:4872309), complete
cds.
ACCESSION BC014946
VERSION BC014946.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255050.
FEATURES Location/Qualifiers
source 1..2670
/db_xref="H-InvDB:HIT000036911"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22951 IMAGE:4872309"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2670
/gene="TOMM40L"
/gene_synonym="RP11-297K8.10"
/gene_synonym="TOMM40B"
/db_xref="GeneID:84134"
/db_xref="HGNC:HGNC:25756"
CDS 187..1113
/gene="TOMM40L"
/gene_synonym="RP11-297K8.10"
/gene_synonym="TOMM40B"
/codon_start=1
/product="TOMM40L protein"
/protein_id="AAH14946.1"
/db_xref="GeneID:84134"
/db_xref="HGNC:HGNC:25756"
/translation="MGNTLGLAPMGTLPRRSPRREEPLPNPGSFDELHRLCKDVFPAQ
MEGVKLVVNKVLSSHFQVAHTIHMSALGLPGYHLHAAYAGDWQLSPTEVFPTVVGDMD
SSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGE
SVIMVAHFLQSLTHRLVLGGELVYHRRPGEEGAILTLAGKYSAVHWVATLNVGSGGAH
ASYYHRANEQVQVGVEFEANTRLQDTTFSFGYHLTLPQANMVFRGLVDSNWCVGAVLE
KKMPPLPVTLALGAFLNHWRNRFHCGFSITVG"
BASE COUNT 640 a 687 c 739 g 604 t
ORIGIN
1 ctagggttgt ctctccatga gtgctctcct tccctactct tcctgttcca ggtgtagcgt
61 cggaccatgt ggaagtttct gaggctgggg agccggataa tggggggtgg ggcccgttgg
121 ggggtaaagg ggcaatagcg tcctttcaca ggctaacctc ggctcttccc agtcctctgg
181 actaaaatgg ggaacacatt gggcctggca ccaatgggga ctttgccccg ccggagcccc
241 cgccgagagg aacccctgcc caaccctggg agcttcgatg agctgcaccg tctatgcaaa
301 gatgtattcc cagcacagat ggagggagtg aagctcgttg tcaacaaggt tctgagcagc
361 catttccagg tggcgcacac tatacacatg agtgccctgg gcttgccggg atatcacctc
421 catgcggcct atgcagggga ttggcagctc agtcccactg aggtgttccc cactgtggta
481 ggggatatgg acagcagtgg cagcctgaac gcccaggtct tgctcctctt ggcagagcgg
541 ctccgagcta aggctgtctt ccagacgcag caggccaagt tcctgacatg gcagtttgat
601 ggcgagtatc ggggagatga ctacacagcc actctgaccc taggaaatcc tgacctgatt
661 ggggagtcgg tgatcatggt tgctcacttc ctgcagagcc tcactcatcg gctggtgctg
721 ggaggagagc tagtttatca ccggcggcca ggcgaagagg gggccatctt gacactggct
781 gggaagtact cggctgtaca ctgggtagct acattgaatg tgggatcagg cggggcccat
841 gcaagttact accacagggc aaatgaacag gttcaggttg gagtggagtt tgaggcaaac
901 acaaggctac aagacacaac attctccttt ggttaccacc tgactctgcc ccaggccaac
961 atggtattta gaggcttggt ggatagtaac tggtgtgtag gtgctgtgct ggagaagaag
1021 atgccccctc tgcctgtcac cctagccctt ggagccttcc tcaatcactg gcgcaacaga
1081 ttccattgtg gcttcagcat cactgtgggc tgaggttgtc cagagccagc ccccacagca
1141 gctggaacct ctgagtcagg tgccctaggg ccaaagacta ggcccctctt cagagcccac
1201 cttgctgggt gatctctagg acccaggagc agagtggtgg acaggaccat gccctcctca
1261 gaactggagc tgccacaggg gcagttgatg aggcagaggt ttgaggatcc cccctctgct
1321 accagcccca gtatcacctt ccccatgctc ttgtggctgt ggactaaggg agaaggatta
1381 aggggtatgg ctgaattccc ccggcacccc ttgccctcag gcttccttct tcctttccct
1441 ttggttaatc ctgcatggga ttagctgacc atcctgtttt ccatcccaga gcctcccaag
1501 gctgggaaag tagggctgaa gggctagatg tttggtctca ggaagtgggg cccacccatt
1561 cccagaagga gcttctttac ctcttagccc tgaggtttcc tccttcccat cttctgtgct
1621 tccagagaac aactttgttc ctatggtcac ccccactaac cccatgaccg catgaagagg
1681 cagttattgc tttagtcttt cattgcaacc actgggctcc ctttgaaccc ggcccaatct
1741 ttggtcccag cattttccca ctccagtgta tccagggtgt tccaggtgag ctggggaagg
1801 aagtgagcat ggcctcagct gcagatctcc tggagcagcg gcatcatggc agacaggccc
1861 tggatgtgct ggatttggta cccgtaggcc tcattaatgc tccggagctc agccagcagg
1921 cctagcaact tcgcatacag aaacctttgg aggaagtagt ggggttgcca ggaaaacagg
1981 agggaaataa ggcagttggg agtcttgtct ctaggccctg atcccctgaa ctattcctca
2041 gtgaagccag gtctgaacat tagagaaaat catgctctgg tatgacagac tatcagaggt
2101 tccaaaggtc ctccaggggg cctcggtctg acactgtctt ctctcaccat gctcagtttt
2161 ttctgaaccc agagctctga gagccgagtg tgaagaaagc tccagacttg gccagaactc
2221 caaccatgtg gaatctgagg gcctggcctt ctagagcagg ttctagaagg tggatgtgtt
2281 ctatggtata aagcatcccc tttctggcca aactagctct tggaggaacg agcaaaacag
2341 aagcggtgca tacctcagag cctggataaa tcacagacta ttgaacctgg aactggcttt
2401 gaccatgaaa ctgtgaatgg ccctaacttc aagggaaatg agaaatcgaa ggaattggcc
2461 caatggcgag gagaggaaag gccaagggaa gagaaaagtc tgcgttagtc tggagaagtt
2521 ggactagtga ggtaatggat gtcatcaatc tcaggaatgc tattacccag agcctctgag
2581 ctactacttt gcatctgtac tgaataaaaa aaaaatctgg aaaaagtgag atgaaaaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//