LOCUS BC014904 2905 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine-rich repeats and death domain containing, mRNA
(cDNA clone MGC:16925 IMAGE:3908102), complete cds.
ACCESSION BC014904
VERSION BC014904.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61742785.
FEATURES Location/Qualifiers
source 1..2905
/db_xref="H-InvDB:HIT000036893"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16925 IMAGE:3908102"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2905
/gene="LRDD"
/gene_synonym="MGC16925"
/gene_synonym="PIDD"
/db_xref="GeneID:55367"
/db_xref="HGNC:HGNC:16491"
/db_xref="MIM:605247"
CDS 86..2767
/gene="LRDD"
/gene_synonym="MGC16925"
/gene_synonym="PIDD"
/codon_start=1
/product="leucine-rich repeats and death domain
containing"
/protein_id="AAH14904.1"
/db_xref="GeneID:55367"
/db_xref="HGNC:HGNC:16491"
/db_xref="MIM:605247"
/translation="MAATVEGPELEAAAAAGDASEDSDAGSRALPFLGGNRLSLDLYP
GGCQQLLHLCVQQPLQLLQVEFLRLSTHEDPQLLEATLAQLPQSLSCLRSLVLKGGQR
RDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCL
SELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGLGS
LLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDNQLR
DLPPELLDAPFVRLQGNPLGEASPDAPSSPVAALIPEMPRLFLTSDLDSFPVTPRGCS
VTLACGVRLQFPAGATATPITIRYRLLLPEPGLVPLGPHDALLSHVLELQPHGVAFQQ
DVGLWLLFTPPQARRCREVVVRTRNDNSWGDLETYLEEEAPQRLWAHCQVPHFSWFLV
VSRPVSNACLVPPEGTLLCSSGHPGVKVIFPPGATEEPRRVSMQVVRMAGRELQALLG
EPEAAVSPLLCLSQSGPPSFLQPVTVQLPLPSGITGLSLDRSRLHLLYWAPPAATWDD
ITAQVVLELTHLYARFQVTHFSWYWLWYTTKNCVGGLARKAWERLRLHRVNLIALQRR
RDPEQVLLQCLPRNKVDATLRRLLERYRGPEPSDTVEMFEGEEFFAAFERGIDVDADR
PDCVEGRICFVFYSHLKNVKEVSFYRGAVPVRVPEEAEAARQRKGADALWMATLPIKL
PRLRGSEGPRRGAGLSLAPLNLGDAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYR
EVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLLVQALEQSDRQDVAEEVRAVL
ELGRRKYQDSIRRMGLAPKDPALPGSSAPQPPEPAQA"
BASE COUNT 448 a 997 c 909 g 551 t
ORIGIN
1 gctgctggcg cttccccggg cgctgcctgg acaggcctgc ctgcgtgctg ggacatgtct
61 ggcctccaag gaccgtcggt gggcgatggc tgcaacggtg gaggggccag agctggaggc
121 agctgctgcc gcaggagatg cttcagagga ttcggacgca gggtccaggg cgctgccttt
181 cctgggcggc aaccggctga gcttggacct gtaccccggg ggctgccagc agctgctgca
241 cctgtgtgtc cagcagcctc ttcagctgct gcaggtggaa ttcttgcgtc tgagcactca
301 cgaggaccct cagctgctgg aggccaccct ggcccagctg cctcagagcc tgtcctgcct
361 ccgctccctg gtcctcaaag gagggcaacg ccgggacaca ctgggtgcct gtctccgggg
421 tgccctgacc aacctgcccg ctggtctgag tggcctggcc catctggccc acctggacct
481 gagcttcaac agcctggaga cactgccggc ctgtgtcctg cagatgcgag gtctgggtgc
541 gctcttgctg tctcacaact gcctctctga gctgcctgag gctctggggg ccctccccgc
601 cctcaccttc ctcacagtga cacacaaccg cctgcagacg ctgcccccag cactgggggc
661 cctatccacc ctgcagcgcc tcgatctctc tcagaatctg ctggacacgc tacctcctga
721 gattggaggc ctgggcagcc tcctggagct caacctggcc tccaaccggc tgcagagcct
781 cccagcctct ctggcgggac ttcggtcctt gcggctcctt gtcctgcaca gcaacctcct
841 ggcctctgtg ccagctgact tggcccgcct tccactcctc acccggctcg acctgaggga
901 caaccagctc cgggacctgc cccctgagct gctagacgcc ccctttgtgc gcctgcaggg
961 gaaccccctg ggtgaggcct cgccagacgc cccgagttca ccagtggcag ccctcattcc
1021 agaaatgccc agactgttcc tgacctcaga tttggacagc tttcctgtga cccctcgagg
1081 ctgctcagtg accctggcct gtggcgtccg cctgcagttc ccagcgggag ccaccgccac
1141 ccccatcacc atccgctatc ggctgctgct gccggagcca ggcctcgtcc ccctgggtcc
1201 tcatgacgcc ctgctcagcc atgtgctgga gctgcagccc catggggtgg ccttccagca
1261 ggatgtgggg ctgtggctgc tcttcacccc accgcaggcc cggcgctgcc gtgaagtggt
1321 ggtcaggacc cggaatgaca acagctgggg tgacctggag acctacctgg aggaagaggc
1381 accccagcgg ctctgggctc actgccaggt gccccacttc tcctggttcc ttgtggtttc
1441 ccgccctgtg tccaatgcct gcctggtgcc accggagggg acactgctgt gctcctcggg
1501 tcatcctggg gtcaaagtca tcttcccccc tggggccact gaggagcctc gtcgagtctc
1561 catgcaggtg gtgcgcatgg ctggccgaga gctgcaggcc ctcctgggag aaccagaggc
1621 tgcagtgagc cccctgctgt gcctgtcaca gagcggtccc cccagcttcc tccaaccggt
1681 caccgtgcag ctgcctctgc cctctggcat cacaggcctc agtctggacc gctcccgcct
1741 gcacctgttg tactgggccc ctcctgcagc cacctgggat gacatcacag ctcaggtggt
1801 cctggagctc acccacctgt acgcacgctt ccaggtcaca cacttctcct ggtactggct
1861 ctggtacacc accaagaact gtgtgggagg cctggctcgg aaggcctggg agcggctgcg
1921 gctgcaccgt gtgaacctca tcgctctgca gcggcgccgg gaccctgagc aggtcctgct
1981 gcagtgcctg ccccgaaaca aggtggacgc cacccttcgg cggctgctgg agcggtaccg
2041 gggccccgag ccctctgaca cggtggagat gttcgagggc gaagagttct ttgcggcctt
2101 cgagcgcggc atcgacgtgg atgctgaccg ccctgactgt gtggagggca gaatctgctt
2161 tgtcttctac tcgcacctga agaatgtgaa ggaggtgtcc ttctaccgtg gcgcggtgcc
2221 tgtgcgggtg cccgaggagg ctgaggctgc ccggcagagg aagggcgcag acgccctgtg
2281 gatggccact ctgcccatca agctgccgag acttcgaggg tccgaggggc cacggcgggg
2341 ggctggcctc tccttggcac ccttgaatct gggagatgcc gagaccggct ttctgacgca
2401 gagcaacctg ctgagtgtgg ctgggcgtct gggtctggac tggccagccg tggccctgca
2461 cctgggggtg tcctaccggg aggtgcagcg catccggcac gagttccggg atgatctgga
2521 tgagcagatc cgtcacatgc tcttctcctg ggctgagcgc caggctgggc agccaggggc
2581 tgtggggctc ctggtgcagg ccctggagca gagtgaccgg caggacgtgg ctgaagaggt
2641 gcgcgcagtc ttggagctcg gccgccgcaa gtaccaggac agcatccgac gcatgggctt
2701 ggcccccaag gaccccgctc tgcctggctc ctcggctcca cagcccccag agcctgccca
2761 ggcctaggcc ccacagactt ttaggctggc ccagatattc cccagtggat gggcagagcc
2821 cccaccttca agtctctcca gtgtgtgggg acgggtccct gtgagcaaca aaactgcact
2881 gtttctttca aaaaaaaaaa aaaaa
//