LOCUS BC014895 2627 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 16 family, member A1, mRNA
(cDNA clone MGC:10204 IMAGE:3910527), complete cds.
ACCESSION BC014895
VERSION BC014895.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2627)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC014895.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222200.
FEATURES Location/Qualifiers
source 1..2627
/db_xref="H-InvDB:HIT000050604"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10204 IMAGE:3910527"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2627
/gene="ALDH16A1"
/gene_synonym="MGC10204"
/db_xref="GeneID:126133"
/db_xref="HGNC:HGNC:28114"
CDS 77..2485
/gene="ALDH16A1"
/gene_synonym="MGC10204"
/codon_start=1
/product="aldehyde dehydrogenase 16 family, member A1"
/protein_id="AAH14895.2"
/db_xref="GeneID:126133"
/db_xref="HGNC:HGNC:28114"
/translation="MAATRAGPRAREIFTSLEYGPVPESHACALAWLDTQDRCLGHYV
NGKWLKPEHRNSVPCQDPITGENLASCLQAQAEDVAAAVEAARMAFKGWSAHPGVVRA
QHLTRLAEVIQKHQRLLWTLESLVTGRAVREVRDGDVQLAQQLLHYHAIQASTQEEAL
AGWEPMGVIGLILPPTFSFLEMMWRICPALAVGCTVVALVPPASPAPLLLAQLAGELG
PFPGILNVVSGPASLVPILASQPGIRKVAFCGAPEEGRALRRSLAGECAELGLALGTE
SLLLLTDTADVDSAVEGVVDAAWSDRGPGGLRLLIQESVWDEAMRRLQERMGRLRSGR
GLDGAVDMGARGAAACDLVQRFVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPAS
PCAQVEVPWPVVVASPFRTAKEALLVANGTPRGGSASVWSERLGQALELGYGLQVGTV
WINAHGLRDPSVPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNLNYDTFGL
AVPSTLPAGPEIGPSPAPPYGLFVGGRFQAPGARSSRPIRDSSGNLHGYVAEGGAKDI
RGAVEAAHQAFPGWAGQSPGARAALLWALAAALERRKSTLASRLERQGAELKAAEAEV
ELSARRLRAWGARVQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLA
PALAYGNTVVMVPSAACPLLALEVCQDMATVFPAGLANVVTGDRDHLTRCLALHQDVQ
AMWYFGSAQGSQFVEWASAGNLKPVWASRGCPRAWDQEAEGAGPELGLRVARTKALWL
PMGD"
BASE COUNT 417 a 830 c 924 g 456 t
ORIGIN
1 gtcgctcttc ggacctcaag gttcccctta acacagagcg ccccgcagtc ttcgcggaaa
61 gcgttcgggg taggcgatgg ctgcgacgcg tgcagggccc cgcgcccgcg agatcttcac
121 ctcgctggag tacggaccgg tgccggagag ccacgcatgc gcactggcct ggctggacac
181 ccaggaccgg tgcttgggcc actatgtgaa tgggaagtgg ttaaagcctg aacacagaaa
241 ttcagtgcct tgccaggatc ccatcacagg agagaacttg gccagttgcc tgcaggcaca
301 ggccgaggat gtggctgcag ccgtggaggc agccaggatg gcatttaagg gctggagtgc
361 gcaccccggc gtcgtccggg cccagcacct gaccaggctg gccgaggtga tccagaagca
421 ccagcggctg ctgtggaccc tggaatccct ggtgactggg cgggctgttc gagaggttcg
481 agacggggac gtccagctgg cccagcagct gctccactac catgcaatcc aggcatccac
541 ccaggaggag gcactggcag gctgggagcc catgggagta attggcctca tcctgccacc
601 cacattctcc ttccttgaga tgatgtggag gatttgccct gccctggctg tgggctgcac
661 cgtggtggcc ctcgtgcccc cggcctcccc ggcgcccctc ctcctggccc agctggcggg
721 ggagctgggc cccttcccgg gaatcctgaa tgtcgtcagt ggccctgcgt ccctggtgcc
781 catcctggcc tcccagcctg gaatccggaa ggtggccttc tgcggagccc cggaggaagg
841 gcgtgccctt cgacggagcc tggcgggtga gtgtgcggag ctgggcctgg cgctggggac
901 ggagtcgctg ctgctgctga cggacacggc ggacgtagac tcggccgtgg agggtgtcgt
961 ggacgccgcc tggtccgacc gcggcccggg tggcctcagg ctcctcatcc aggagtctgt
1021 gtgggatgaa gccatgagac ggctgcagga gcggatgggg cggcttcgga gtggccgagg
1081 gctggatggg gccgtggaca tgggggcccg gggggctgcc gcatgtgacc tggtccagcg
1141 ctttgtgcgt gaggcccaga gccagggtgc acaggtgttc caggctggtg atgtgccttc
1201 ggaacgccca ttctatcccc caaccttggt ctccaacctg cccccagcct ccccatgtgc
1261 ccaggtggag gtgccgtggc ctgtggtcgt ggcctccccc ttccgcacag ccaaggaggc
1321 actgttggtg gccaacggga cgccccgcgg gggcagcgcc agtgtgtgga gcgagaggct
1381 ggggcaggcg ctggagctgg gctatgggct ccaagtgggc actgtctgga tcaacgccca
1441 cggcctcaga gacccttcgg tgcccacagg cggctgcaag gagagtgggt gttcctggca
1501 cgggggccca gacgggctgt atgagtatct gcggccctca gggacccctg cccggctgtc
1561 ctgcctctcc aagaacctga actatgacac ctttggcctc gctgttccct caaccctgcc
1621 ggctgggcct gaaatagggc ccagcccagc acccccctat gggctcttcg ttgggggccg
1681 tttccaggct cctggggccc gaagctccag gcccatccgg gattcgtctg gcaacctcca
1741 tggctacgtg gctgagggtg gagccaagga catccgaggt gctgtggagg ccgctcacca
1801 ggctttccct ggctgggcgg gccagtcccc aggagcccgg gcagccctgc tgtgggccct
1861 ggcggctgca ctggagcgcc ggaagtctac cctggcctcg aggctggaga ggcagggagc
1921 ggagctcaag gctgcggagg cggaggtgga gctgagcgca agacgacttc gggcgtgggg
1981 ggcccgggtg caggcccaag gccacaccct gcaggtagcc gggctgagag gccctgtgct
2041 gcgcctgcgg gagccgctgg gtgtgctggc tgtggtgtgt ccggacgagt ggcccctgct
2101 tgccttcgtg tccctgctgg ctcccgccct ggcctacggc aacactgtgg tcatggtgcc
2161 cagtgcggcc tgtcctctgc tggccctgga ggtctgccag gacatggcca ccgtgttccc
2221 agcaggcctg gccaacgtgg tgacaggaga ccgggaccat ctgacccgct gcctggcctt
2281 gcaccaagac gtccaggcca tgtggtattt cggatcagcc cagggttccc agtttgtcga
2341 gtgggcctcg gcaggaaacc tcaaaccggt gtgggcgagc aggggctgcc cgcgggcctg
2401 ggaccaggag gccgaggggg caggcccaga gctggggctg cgagtggcgc ggaccaaggc
2461 cctgtggctg cctatggggg actgatgcct gagcgccacc tactgcattt tggacacctc
2521 acaccaaggg gagatgcacc ccacggacac ctgggacttt ccccttctgg ttcctgtgtc
2581 tcccaataaa ctctctgacc aaccctaaaa aaaaaaaaaa aaaaaaa
//