LOCUS BC014785 1458 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens epithelial cell adhesion molecule, mRNA (cDNA clone
MGC:9040 IMAGE:3861826), complete cds.
ACCESSION BC014785
VERSION BC014785.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1458)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1458)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505058.
FEATURES Location/Qualifiers
source 1..1458
/db_xref="H-InvDB:HIT000036855"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9040 IMAGE:3861826"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1458
/gene="EPCAM"
/gene_synonym="CO-17A"
/gene_synonym="CO17-1A"
/gene_synonym="EGP"
/gene_synonym="EGP-2"
/gene_synonym="EGP34"
/gene_synonym="EGP40"
/gene_synonym="Ep-CAM"
/gene_synonym="ESA"
/gene_synonym="hEGP-2"
/gene_synonym="KS1/4"
/gene_synonym="KSA"
/gene_synonym="MK-1"
/gene_synonym="TACST-1"
/gene_synonym="TROP1"
/db_xref="GeneID:4072"
/db_xref="HGNC:HGNC:11529"
/db_xref="MIM:185535"
CDS 183..1127
/gene="EPCAM"
/gene_synonym="CO-17A"
/gene_synonym="CO17-1A"
/gene_synonym="EGP"
/gene_synonym="EGP-2"
/gene_synonym="EGP34"
/gene_synonym="EGP40"
/gene_synonym="Ep-CAM"
/gene_synonym="ESA"
/gene_synonym="hEGP-2"
/gene_synonym="KS1/4"
/gene_synonym="KSA"
/gene_synonym="MK-1"
/gene_synonym="TACST-1"
/gene_synonym="TROP1"
/codon_start=1
/product="epithelial cell adhesion molecule"
/protein_id="AAH14785.1"
/db_xref="GeneID:4072"
/db_xref="HGNC:HGNC:11529"
/db_xref="MIM:185535"
/translation="MAPPQVLAFGLLLAAATATFAAAQEECVCENYKLAVNCFVNNNR
QCQCTSVGAQNTVICSKLAAKCLVMKAEMNGSKLGRRAKPEGALQNNDGLYDPDCDES
GLFKAKQCNGTSTCWCVNTAGVRRTDKDTEITCSERVRTYWIIIELKHKAREKPYDSK
SLRTALQKEITTRYQLDPKFITSILYENNVITIDLVQNSSQKTQNDVDIADVAYYFEK
DVKGESLFHSKKMDLTVNGEQLDLDPGQTLIYYVDEKAPEFSMQGLKAGVIAVIVVVV
IAVVAGIVVLVISRKKRMAKYEKAEIKEMGEMHRELNA"
BASE COUNT 431 a 305 c 351 g 371 t
ORIGIN
1 ccttcggcga gcgagcacct tcgacgcggt ccggggaccc cctcgtcgct gtcctcccga
61 cgcggacccg cgtgccccag gcctcgcgct gcccggccgg ctcctcgtgt cccactcccg
121 gcgcacgccc tcccgcgagt cccgggcccc tcccgcgccc ctcttctcgg cgcgcgcgca
181 gcatggcgcc cccgcaggtc ctcgcgttcg ggcttctgct tgccgcggcg acggcgactt
241 ttgccgcagc tcaggaagaa tgtgtctgtg aaaactacaa gctggccgta aactgctttg
301 tgaataataa tcgtcaatgc cagtgtactt cagttggtgc acaaaatact gtcatttgct
361 caaagctggc tgccaaatgt ttggtgatga aggcagaaat gaatggctca aaacttggga
421 gaagagcaaa acctgaaggg gccctccaga acaatgatgg gctttatgat cctgactgcg
481 atgagagcgg gctctttaag gccaagcagt gcaacggcac ctccacgtgc tggtgtgtga
541 acactgctgg ggtcagaaga acagacaagg acactgaaat aacctgctct gagcgagtga
601 gaacctactg gatcatcatt gaactaaaac acaaagcaag agaaaaacct tatgatagta
661 aaagtttgcg gactgcactt cagaaggaga tcacaacgcg ttatcaactg gatccaaaat
721 ttatcacgag tattttgtat gagaataatg ttatcactat tgatctggtt caaaattctt
781 ctcaaaaaac tcagaatgat gtggacatag ctgatgtggc ttattatttt gaaaaagatg
841 ttaaaggtga atccttgttt cattctaaga aaatggacct gacagtaaat ggggaacaac
901 tggatctgga tcctggtcaa actttaattt attatgttga tgaaaaagca cctgaattct
961 caatgcaggg tctaaaagct ggtgttattg ctgttattgt ggttgtggtg atagcagttg
1021 ttgctggaat tgttgtgctg gttatttcca gaaagaagag aatggcaaag tatgagaagg
1081 ctgagataaa ggagatgggt gagatgcata gggaactcaa tgcataacta tataatttga
1141 agattataga agaagggaaa tagcaaatgg acacaaatta caaatgtgtg tgcgtgggac
1201 gaagacatct ttgaaggtca tgagtttgtt agtttaacat catatatttg taatagtgaa
1261 acctgtactc aaaatataag cagcttgaaa ctggctttac caatcttgaa atttgaccac
1321 aagtgtctta tatatgcaga tctaatgtaa aatccagaac ttggactcca tcgttaaaat
1381 tatttatgtg taacattcaa atgtgtgcat taaatatgct tccacagtaa aatctgaaaa
1441 actgaaaaaa aaaaaaaa
//