LOCUS BC014781 1360 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lecithin-cholesterol acyltransferase, mRNA (cDNA clone
MGC:17087 IMAGE:4155094), complete cds.
ACCESSION BC014781
VERSION BC014781.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1360)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1360)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557891.
FEATURES Location/Qualifiers
source 1..1360
/db_xref="H-InvDB:HIT000036854"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17087 IMAGE:4155094"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1360
/gene="LCAT"
/db_xref="GeneID:3931"
/db_xref="HGNC:HGNC:6522"
/db_xref="MIM:606967"
CDS 2..1324
/gene="LCAT"
/codon_start=1
/product="lecithin-cholesterol acyltransferase"
/protein_id="AAH14781.1"
/db_xref="GeneID:3931"
/db_xref="HGNC:HGNC:6522"
/db_xref="MIM:606967"
/translation="MGPPGSPWQWVTLLLGLLLPPAAPFWLLNVLFPPHTTPKAELSN
HTRPVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWIDN
TRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSKLAGYLHTLVQNLVNNGYVRD
ETVRAAPYDWRLEPGQQEEYYRKLAGLVEEMHAAYGKPVFLIGHSLGCLHLLYFLLRQ
PQAWKDRFIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRITTTSPWM
FPSRMAWPEDHVFISTPSFNYTGRDFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVE
VYCLYGVGLPTPRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVH
LLPLHGIQHLNMVFSNLTLEHINAILLGAYRQGPPASPTASPEPPPPE"
BASE COUNT 264 a 456 c 365 g 275 t
ORIGIN
1 aatggggccg cccggctccc catggcagtg ggtgacgctg ctgctggggc tgctgctccc
61 tcctgccgcc cccttctggc tcctcaatgt gctcttcccc ccgcacacca cgcccaaggc
121 tgagctcagt aaccacacac ggcccgtcat cctcgtgccc ggctgcctgg ggaatcagct
181 agaagccaag ctggacaaac cagatgtggt gaactggatg tgctaccgca agacagagga
241 cttcttcacc atctggctgg atctcaacat gttcctaccc cttggggtag actgctggat
301 cgataacacc agggttgtct acaaccggag ctctgggctc gtgtccaacg cccctggtgt
361 ccagatccgc gtccctggct ttggcaagac ctactctgtg gagtacctgg acagcagcaa
421 gctggcaggg tacctgcaca cactggtgca gaacctggtc aacaatggct acgtgcggga
481 cgagactgtg cgcgccgccc cctatgactg gcggctggag cccggccagc aggaggagta
541 ctaccgcaag ctcgcagggc tggtggagga gatgcacgct gcctatggga agcctgtctt
601 cctcattggc cacagcctcg gctgtctaca cttgctctat ttcctgctgc gccagcccca
661 ggcctggaag gaccgcttta ttgatggctt catctctctt ggggctccct ggggtggctc
721 catcaagccc atgctggtct tggcctcagg tgacaaccag ggcatcccca tcatgtccag
781 catcaagctg aaagaggagc agcgcataac caccacctcc ccctggatgt ttccctctcg
841 catggcgtgg cctgaggacc acgtgttcat ttccacaccc agcttcaact acacaggccg
901 tgacttccaa cgcttctttg cagacctgca ctttgaggaa ggctggtaca tgtggctgca
961 gtcacgtgac ctcctggcag gactcccagc acctggtgtg gaagtatact gtctttacgg
1021 cgtgggcctg cccacgcccc gcacctacat ctacgaccac ggcttcccct acacggaccc
1081 tgtgggtgtg ctctatgagg atggtgatga cacggtggcg acccgcagca ccgagctctg
1141 tggcctgtgg cagggccgcc agccacagcc tgtgcacctg ctgcccctgc acgggataca
1201 gcatctcaac atggtcttca gcaacctgac cctggagcac atcaatgcca tcctgctggg
1261 tgcctaccgc cagggtcccc ctgcatcccc gactgccagc ccagagcccc cgcctcctga
1321 ataaagacct tcctttgcta ccgtaaaaaa aaaaaaaaaa
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