LOCUS BC014665 1418 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alcohol dehydrogenase 5 (class III), chi polypeptide,
mRNA (cDNA clone MGC:23126 IMAGE:4853366), complete cds.
ACCESSION BC014665
VERSION BC014665.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496890.
FEATURES Location/Qualifiers
source 1..1418
/db_xref="H-InvDB:HIT000036844"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23126 IMAGE:4853366"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1418
/gene="ADH5"
/gene_synonym="ADH-3"
/gene_synonym="ADHX"
/db_xref="GeneID:128"
/db_xref="HGNC:HGNC:253"
/db_xref="MIM:103710"
CDS 3..1127
/gene="ADH5"
/gene_synonym="ADH-3"
/gene_synonym="ADHX"
/codon_start=1
/product="alcohol dehydrogenase 5 (class III), chi
polypeptide"
/protein_id="AAH14665.1"
/db_xref="GeneID:128"
/db_xref="HGNC:HGNC:253"
/db_xref="MIM:103710"
/translation="MANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAV
CHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKF
CLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI
DPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASR
IIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR
AALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSE
YMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI"
BASE COUNT 427 a 260 c 354 g 377 t
ORIGIN
1 acatggcgaa cgaggttatc aagtgcaagg ctgcagttgc ttgggaggct ggaaagcctc
61 tctccataga ggagatagag gtggcacccc caaaggctca tgaagttcga atcaagatca
121 ttgccactgc ggtttgccac accgatgcct ataccctgag tggagctgat cctgagggtt
181 gttttccagt gatcttggga catgaaggtg ctggaattgt ggaaagtgtt ggtgagggag
241 ttactaagct gaaggcgggt gacactgtca tcccacttta catcccacag tgtggagaat
301 gcaaattttg tctaaatcct aaaactaacc tttgccagaa gataagagtc actcaaggga
361 aaggattaat gccagatggt accagcagat ttacttgcaa aggaaagaca attttgcatt
421 acatgggaac cagcacattt tctgaataca cagttgtggc tgatatctct gttgctaaaa
481 tagatccttt agcacctttg gataaagtct gccttctagg ttgtggcatt tcaaccggtt
541 atggtgctgc tgtgaacact gccaagttgg agcctggctc tgtttgtgcc gtctttggtc
601 tgggaggagt cggattggca gttatcatgg gctgtaaagt ggctggtgct tcccggatca
661 ttggtgtgga catcaataaa gataaatttg caagggccaa agagtttgga gccactgaat
721 gtattaaccc tcaggatttt agtaaaccca tccaggaagt gctcattgag atgaccgatg
781 gaggagtgga ctattccttt gaatgtattg gtaatgtgaa ggtcatgaga gcagcacttg
841 aggcatgtca caagggctgg ggcgtcagcg tcgtggttgg agtagctgct tcaggtgaag
901 aaattgccac tcgtccattc cagctggtaa caggtcgcac atggaaaggc actgcctttg
961 gaggatggaa gagtgtagaa agtgtcccaa agttggtgtc tgaatatatg tccaaaaaga
1021 taaaagttga tgaatttgtg actcacaatc tgtcttttga tgaaatcaac aaagcctttg
1081 aactgatgca ttctggaaag agcattcgaa ctgttgtaaa gatttaattc aaaagagaaa
1141 aataatgtcc atcctgtcgt gatgtgatag gagcagctta acaggcaggg agaagcgcct
1201 ccaacctcac agcctcgtag agcttcacag ctactccaga aaatagggtt atgtgtgtca
1261 ttcatgaatc tctataatca aggacaagga taattcagtc atgaacctgt tttctggatg
1321 ctcctccaca taaataattg ctagtttatt aaggaatatt ttaacataat aaaagtaatt
1381 tctaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaac
//