LOCUS BC014613 1586 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntaxin 18, mRNA (cDNA clone MGC:3333 IMAGE:2960768),
complete cds.
ACCESSION BC014613
VERSION BC014613.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1586)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1586)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC014613.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: e Column: 15.
FEATURES Location/Qualifiers
source 1..1586
/db_xref="H-InvDB:HIT000036811"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3333 IMAGE:2960768"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1586
/gene="STX18"
/gene_synonym="Ufe1"
/db_xref="GeneID:53407"
/db_xref="HGNC:HGNC:15942"
/db_xref="MIM:606046"
CDS 7..1014
/gene="STX18"
/gene_synonym="Ufe1"
/codon_start=1
/product="syntaxin 18"
/protein_id="AAH14613.1"
/db_xref="GeneID:53407"
/db_xref="HGNC:HGNC:15942"
/db_xref="MIM:606046"
/translation="MAVDITLLFRASVKTVKTRNKALGVAVGGGVDGSRDELFRRSPR
PKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQI
FMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRV
VDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW
GDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQ
QEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYD
S"
BASE COUNT 493 a 346 c 405 g 342 t
ORIGIN
1 gtcgctatgg cggtggacat cacgctgcta ttccgggcca gcgtcaagac cgtgaagacg
61 cggaacaagg cgctgggagt ggcggtgggc ggcggggtcg atggcagccg ggacgagctg
121 ttccgccgga gcccccggcc caagggcgac ttctccagcc gggcccgcga agtgatttct
181 cacattggca aactgagaga ttttcttctg gaacacagga aagattatat taatgcttat
241 agccatacca tgtctgaata tgggaggatg acagacacag aacgagacca gatagaccag
301 gatgcccaga tattcatgag gacctgttca gaagcaattc agcaactacg aacagaagct
361 cacaaggaga tacattccca gcaagtgaag gagcacagga ccgctgtttt ggatttcatt
421 gaagattact tgaaaagagt atgtaaactt tactcagaac agagagccat ccgagttaaa
481 agagtggtgg ataagaaaag attatctaag ttggaaccag aaccaaatac aaagacaaga
541 gaatccacat cttctgagaa agtttcacag agtccttcaa aagactctga agaaaaccct
601 gccactgaag aacgtccaga aaaaattttg gctgaaacac aacctgaatt gggaacgtgg
661 ggagatggca aaggcgaaga tgagttatcc ccagaagaaa tacaaatgtt tgaacaggaa
721 aatcagcgac taattggtga aatgaacagc ttgtttgatg aagtgaggca aatcgaaggg
781 agagtggttg agatttccag actccaagag atattcacgg aaaaggtttt gcaacaggaa
841 gctgagattg acagcattca ccagttagtt gtgggggcaa ctgaaaatat caaggaaggc
901 aacgaagaca taagagaggc cattaaaaac aacgctggct tccgcgtgtg gatcctcttc
961 ttcctcgtga tgtgctcctt ctccttgctc ttcctcgact ggtacgacag ctagccaggg
1021 ccacgggggc ccagcacgag agtcctcatg ggcactcaca gactgcgtgc tttcatgtac
1081 ttccagtgct ggagcatggt atgaccagat tttatcacag tgccatttga agggaaagga
1141 gttcagacag acagacgtat tccccaaaaa gggatacccc aggccgatgg tgttcagcca
1201 tttagcagct gaaaaaggaa acagtgcaca ccaatgggag gcagcctgcg tagccctcat
1261 caggcaagac agactgaatg caggagtggg tgattagctg ctccttgaac ttgaggctgc
1321 cttggcagca ggggcacagc aggcctcaag agcccctaat tgtctcaggg ttcaaaggaa
1381 gacactgacc tttcccatcc cggtagcttc agggaagatc atagttaata acgtctctca
1441 acaaatgatt acttctttgt ttccttgtgg cttcttgtct gtctgagtca acgaatacac
1501 agacttactg gattatagaa gagaaaattc acatctgcct tgttaatcta ataaatataa
1561 ttacagccaa aaaaaaaaaa aaaaaa
//