LOCUS BC014595 1288 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens calreticulin 3, mRNA (cDNA clone MGC:26577
IMAGE:4822010), complete cds.
ACCESSION BC014595
VERSION BC014595.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1288)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC014595.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222181.
FEATURES Location/Qualifiers
source 1..1288
/db_xref="H-InvDB:HIT000036797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26577 IMAGE:4822010"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1288
/gene="CALR3"
/gene_synonym="CRT2"
/gene_synonym="FLJ25355"
/gene_synonym="MGC26577"
/db_xref="GeneID:125972"
/db_xref="HGNC:HGNC:20407"
CDS 64..1218
/gene="CALR3"
/gene_synonym="CRT2"
/gene_synonym="FLJ25355"
/gene_synonym="MGC26577"
/codon_start=1
/product="calreticulin 3"
/protein_id="AAH14595.1"
/db_xref="GeneID:125972"
/db_xref="HGNC:HGNC:20407"
/translation="MARALVQFWAICMLRVALATVYFQEEFLDGEHWRNRWLQSTNDS
RFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQK
MDCGGGYIKVFPADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNKYHENKKL
IRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGSIEYDWNLTSLKKETSPAESKDWE
QTKDNKAQDWEKHFLDASTSKQSDWNGDLDGDWPAPMLQKPPYQDGLKPEGIHKDVWL
HRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYADNFGKATWG
ETKGPEREMDAIQAKEEMKKAREEEEEELLSGKINRHEHYFNQFHRRNEL"
BASE COUNT 407 a 262 c 332 g 287 t
ORIGIN
1 agaggcgcag agagagctgg gagctaaggg gtggcggcga ccggaagcgc agtgcacacc
61 cccatggccc gggctttggt ccagttctgg gccatatgca tgctgcgagt ggcgctggct
121 accgtctatt tccaagagga atttctagac ggagagcatt ggagaaaccg atggttgcag
181 tccaccaatg actcccgatt tgggcatttt agactttcgt cgggcaagtt ttatggtcat
241 aaagagaaag ataaaggtct gcaaaccact cagaatggcc gattctatgc catctctgca
301 cgcttcaaac cgttcagcaa taaagggaaa actctggtta ttcagtacac agtaaaacat
361 gagcagaaga tggactgtgg agggggctac attaaggtct ttcctgcaga cattgaccag
421 aagaacctga atggaaaatc gcaatactat attatgtttg gacccgatat ttgtggattt
481 gatatcaaga aagttcatgt tattttacat ttcaagaata agtatcacga aaacaagaaa
541 ctgatcaggt gtaaggttga tggcttcaca cacctgtaca ctctaatttt aagaccagat
601 ctttcttatg atgtgaaaat tgatggtcag tcaattgaat ccggcagcat agagtacgac
661 tggaacttaa catcactcaa gaaggaaacg tccccggcag aatcgaagga ttgggaacag
721 actaaagaca acaaagccca ggactgggag aagcattttc tggacgccag caccagcaag
781 cagagcgact ggaacggtga cctggatggg gactggccag cgccgatgct ccagaagccc
841 ccgtaccagg atggcctgaa accagaaggt attcataaag acgtctggct ccaccgtaag
901 atgaagaata ccgactattt gacgcagtat gacctctcag aatttgagaa cattggtgcc
961 attggcctgg agctttggca ggtgagatct ggaaccattt ttgataactt tctgatcaca
1021 gatgatgaag agtatgcaga taattttggc aaggccacct ggggcgaaac caagggtcca
1081 gaaagggaga tggatgccat acaggccaag gaggaaatga agaaggcccg cgaggaagag
1141 gaggaagagc tgctgtcggg aaaaattaac aggcacgaac attacttcaa tcaatttcac
1201 agaaggaatg aactttagtg atccccattg gatataagga tgactggtaa aatctcattg
1261 ctactttaat ctaaaaaaaa aaaaaaaa
//