LOCUS BC014594 976 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA
clone MGC:26328 IMAGE:4821535), complete cds.
ACCESSION BC014594
VERSION BC014594.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 976)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 976)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC014594.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27374999.
FEATURES Location/Qualifiers
source 1..976
/db_xref="H-InvDB:HIT000036796"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26328 IMAGE:4821535"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..976
/gene="GABARAPL2"
/gene_synonym="GEF-2"
/gene_synonym="GEF2"
/db_xref="GeneID:11345"
/db_xref="HGNC:HGNC:13291"
/db_xref="MIM:607452"
CDS 96..449
/gene="GABARAPL2"
/gene_synonym="GEF-2"
/gene_synonym="GEF2"
/codon_start=1
/product="GABA(A) receptor-associated protein-like 2"
/protein_id="AAH14594.1"
/db_xref="GeneID:11345"
/db_xref="HGNC:HGNC:13291"
/db_xref="MIM:607452"
/translation="MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDI
DKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDED
GFLYVAYSGENTFGF"
BASE COUNT 264 a 195 c 222 g 295 t
ORIGIN
1 gctgccactg ccgctgccgc cgtcgttgtt gttgtgctcg gtgcgctgag ctccgcggct
61 ccgcgagccg gttccgtccc cttcccgccg ccgccatgaa gtggatgttc aaggaggacc
121 actcgctgga acacagatgc gtggagtccg cgaagattcg agcgaaatat cccgacaggg
181 ttccggtgat tgtggaaaag gtctcaggct ctcagattgt tgacattgac aaacggaagt
241 acttggttcc atctgatatc actgtggctc agttcatgtg gatcatcagg aaaaggatcc
301 agcttccttc tgaaaaggcg atcttcctgt ttgtggataa gacagtccca cagtccagcc
361 taactatggg acagctttac gagaaggaaa aagatgaaga tggattctta tatgtggcct
421 acagcggaga gaacactttt ggcttctgag ggccattgct gggctaggtg caccgtaact
481 gcttgtgtat cttgtaaata gccagccatt ttcagttatt ataccagaac ctcttcacat
541 agacctatta gtgcatttgt aactggattt atttcttaat atattggaag gttttgtttc
601 cttagactag taaattatca tacagagttt tattttgagt ttttcttttt gtgcattgtc
661 ctcatgcctg tattccccag gaaacttgtc cttctggaaa tcatattgaa tgatatttct
721 atatcgaagt gaggtaggtg cggtattaaa gtgaaaggga aggtgatgca tttattctgg
781 gttatgcttg aagtgttaga tggctaagta ttaaaattat ccaaattaaa tccttagcag
841 tcagaacact tgcttcacta gaatatgcca actgccaatc atgttggact gagctaattt
901 gttcctcttt ctgaaactat taaggtaaat aattaacaat aaaaattctc ttataaaggc
961 aaaaaaaaaa aaaaaa
//