LOCUS BC014492 1608 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens Alstrom syndrome 1 pseudogene, mRNA (cDNA clone
IMAGE:4850300).
ACCESSION BC014492
VERSION BC014492.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1608)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1608)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21686980.
FEATURES Location/Qualifiers
source 1..1608
/db_xref="H-InvDB:HIT000036739"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4850300"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 506 a 326 c 437 g 339 t
ORIGIN
1 gaaagattca tttattcatt caacaaacag tggccgaagg cttgttatgt gctgtgcctg
61 gacttggcat gaaggcacca gatgtcagaa gcgaggctgc tgcccaggag gacacacctg
121 atggggctct gggaccagga cgatggtgga gacatcacat ccggaataac tttgttagga
181 aggtgaactt gacagttagg acttagttct ccttgaagac gtccttcaca tccctttttc
241 ctgagctcga actctacttt ttgcaacaag cagaatgtac acatgttaaa caagggcaca
301 caagcaggta acttggagat tgtgaacggt gccgaaaaac acactcgagc caactccaag
361 ttccagcgag gctaaattgg aagaggacag tgatgtgact tcttggtcag aagaaaaaca
421 tgaagagaaa atgctcttta ccagttatcc tgaggacaga aagttaaaaa agaacaagaa
481 gaatgcccat gaaggagttt cctggtttgt tcctttggaa aatgtggagt ctagataaaa
541 agaaggaaaa catgctcaag actcatgacc ctggcatctc ccggttggaa ccagtaacca
601 agaccaagcc gtggagggag ccactgtggg agcggaactg gcaggggcag cacctggaca
661 gtcggggcta cctggcaggc ccaggcagag aggatggcag aaacccactg aagctgtttg
721 tgagagcaac cctgcaggaa tcgcttcagt ttcacagacc tgacttcatc tcccacattt
781 gggagcggat aaagcgtctg aagttaatag tccaggagag aaagctgcag agcatgttaa
841 agagcgagcg ggatgcgcta ttcgacattg acagggaacg gcagggccac cagaatcgca
901 tgcgcccact acccaagaga gtcttcctgg ctgtccagaa gaacaagcct atcagcaaga
961 aggaaatgat tcagaggtcc aaacggacac acgcaggagg aacagtagca caaaggcttc
1021 ccggtgcctt gtgggtgaaa gaaaggcttc cagggaaagg agagaaacac ccagggatcc
1081 cggtgacgtc gggaagcagc acccagacca tgtaaggaca ccgcctgcag ggggagactc
1141 aaggcctggg aaggttttct aatctgtgcc ttgagtcggg tggggggatt ttctgggaaa
1201 ggaaaaccag acacagtagg acaaatattg tatagtttca cttatatgaa attgtcagaa
1261 taggcaagtt cgtagagaca gaatgtagaa cagggctttc cgggggctgg aggagaagac
1321 aaggagttct tgcctagtgg gtacagagtt tctgtttgaa atgatgaaaa acttctggaa
1381 atagattgtg gtgacagtta cacaccattg tgaacataat tagtaccact gaactgtaca
1441 cgttaaaatg gttagttgta tgttttatgt attttgccat aataaaaact agggggaaaa
1501 aaaggaaggg gagattgtct caggctggct gactttccct gcatgtacgc acatcttcac
1561 atgtgcacac atgtaaaaca aaaatgaagc aaaaaaaaaa aaaaaaaa
//