LOCUS BC014459 545 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein L23a, mRNA (cDNA clone MGC:23063
IMAGE:4872948), complete cds.
ACCESSION BC014459
VERSION BC014459.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 545)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62739175.
FEATURES Location/Qualifiers
source 1..545
/db_xref="H-InvDB:HIT000036714"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23063 IMAGE:4872948"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..545
/gene="RPL23A"
/gene_synonym="FLJ27455"
/gene_synonym="MDA20"
/db_xref="GeneID:6147"
/db_xref="HGNC:HGNC:10317"
/db_xref="MIM:602326"
CDS 5..475
/gene="RPL23A"
/gene_synonym="FLJ27455"
/gene_synonym="MDA20"
/codon_start=1
/product="ribosomal protein L23a"
/protein_id="AAH14459.1"
/db_xref="GeneID:6147"
/db_xref="HGNC:HGNC:10317"
/db_xref="MIM:602326"
/translation="MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSP
TFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDV
KANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII"
BASE COUNT 185 a 128 c 123 g 109 t
ORIGIN
1 caagatggcg ccgaaagcga agaaggaagc tcctgcccct cctaaagctg aagccaaagc
61 gaaggcttta aaggccaaga aggcagtgtt gaaaggtgtc cacagccaca aaaagaagaa
121 gatccgcacg tcacccacct tccggcggcc gaagacactg cgactccgga gacagcccaa
181 atatcctcgg aagagcgctc ccaggagaaa caagcttgac cactatgcta tcatcaagtt
241 tccgctgacc actgagtctg ccatgaagaa gatagaagac aacaacacac ttgtgttcat
301 tgtggatgtt aaagccaaca agcaccagat taaacaggct gtgaagaagc tgtatgacat
361 tgatgtggcc aaggtcaaca ccctgattcg gcctgatgga gagaagaagg catatgttcg
421 actggctcct gattacgatg ctttggatgt tgccaacaaa attgggatca tctaaactga
481 gtccagctgc ctaattctga atatatatat atatatatct tttcaccaaa aaaaaaaaaa
541 aaaaa
//