LOCUS BC014435 2044 bp mRNA linear HUM 13-SEP-2007
DEFINITION Homo sapiens hemopoietic cell kinase, mRNA (cDNA clone MGC:22922
IMAGE:4855747), complete cds.
ACCESSION BC014435
VERSION BC014435.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2044)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2044)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30795228.
FEATURES Location/Qualifiers
source 1..2044
/db_xref="H-InvDB:HIT000036698"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22922 IMAGE:4855747"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2044
/gene="HCK"
/gene_synonym="JTK9"
/db_xref="GeneID:3055"
/db_xref="HGNC:HGNC:4840"
/db_xref="MIM:142370"
CDS 124..1704
/gene="HCK"
/gene_synonym="JTK9"
/note="alternative start codon"
/codon_start=1
/product="hemopoietic cell kinase"
/protein_id="AAH14435.2"
/db_xref="GeneID:3055"
/db_xref="HGNC:HGNC:4840"
/db_xref="MIM:142370"
/translation="MGGRSSCEDPGCPRDEERAPRMGCMKSKFLQVGGNTFSKTETSA
SPHCPVYVPDPTSTIKPGPNSHNSNTPGIREAGSEDIIVVALYDYEAIHHEDLSFQKG
DQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLA
PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFST
LQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEV
WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE
FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS
LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI
VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ
SVLDDFYTATESQYQQQP"
BASE COUNT 523 a 572 c 566 g 383 t
ORIGIN
1 ctcagacagt gcaggacgag aaacgcccgc ggcaccaaag cccctcagag cgtcgccccc
61 gcctctagtt ctagaaagtc agtttcccgg cactggcacc ccggaacctc aggggctgcc
121 gagctggggg ggcgctcaag ctgcgaggat ccgggctgcc cgcgagacga ggagcgggcg
181 cccaggatgg ggtgcatgaa gtccaagttc ctccaggtcg gaggcaatac attctcaaaa
241 actgaaacca gcgccagccc acactgtcct gtgtacgtgc cggatcccac atccaccatc
301 aagccggggc ctaatagcca caacagcaac acaccaggaa tcagggaggc aggctctgag
361 gacatcatcg tggttgccct gtatgattac gaggccattc accacgaaga cctcagcttc
421 cagaaggggg accagatggt ggtcctagag gaatccgggg agtggtggaa ggctcgatcc
481 ctggccaccc ggaaggaggg ctacatccca agcaactatg tcgcccgcgt tgactctctg
541 gagacagagg agtggttttt caagggcatc agccggaagg acgcagagcg ccaactgctg
601 gctcccggca acatgctggg ctccttcatg atccgggata gcgagaccac taaaggaagc
661 tactctttgt ccgtgcgaga ctacgaccct cggcagggag ataccgtgaa acattacaag
721 atccggaccc tggacaacgg gggcttctac atatcccccc gaagcacctt cagcactctg
781 caggagctgg tggaccacta caagaagggg aacgacgggc tctgccagaa actgtcggtg
841 ccctgcatgt cttccaagcc ccagaagcct tgggagaaag atgcctggga gatccctcgg
901 gaatccctca agctggagaa gaaacttgga gctgggcagt ttggggaagt ctggatggcc
961 acctacaaca agcacaccaa ggtggcagtg aagacgatga agccagggag catgtcggtg
1021 gaggccttcc tggcagaggc caacgtgatg aaaactctgc agcatgacaa gctggtcaaa
1081 cttcatgcgg tggtcaccaa ggagcccatc tacatcatca cggagttcat ggccaaagga
1141 agcttgctgg actttctgaa aagtgatgag ggcagcaagc agccattgcc aaaactcatt
1201 gacttctcag cccagattgc agaaggcatg gccttcatcg agcagaggaa ctacatccac
1261 cgagacctcc gagctgccaa catcttggtc tctgcatccc tggtgtgtaa gattgctgac
1321 tttggcctgg cccgggtcat tgaggacaac gagtacacgg ctcgggaagg ggccaagttc
1381 cccatcaagt ggacagctcc tgaagccatc aactttggct ccttcaccat caagtcagac
1441 gtctggtcct ttggtatcct gctgatggag atcgtcacct acggccggat cccttaccca
1501 gggatgtcaa accctgaagt gatccgagct ctggagcgtg gataccggat gcctcgccca
1561 gagaactgcc cagaggagct ctacaacatc atgatgcgct gctggaaaaa ccgtccggag
1621 gagcggccga ccttcgaata catccagagt gtgctggatg acttctacac ggccacagag
1681 agccagtacc aacagcagcc atgataggga ggaccagggc agggccaggg ggtgcccagg
1741 tggtggctgc aaggtggctc cagcaccatc cgccagggcc cacaccccct tcctactccc
1801 agacacccac cctcgcttca gccacagttt cctcatctgt ccagtgggta ggttggactg
1861 gaaaatctct ttttgactct tgcaatccac aatctgacat tctcaggaag cccccaagtt
1921 gatatttcta tttcctggaa tggttggatt ttagttacag ctgtgatttg gaagggaaac
1981 tttcaaaata gtgaaatgaa tatttaaata aaagatataa atgccaaaaa aaaaaaaaaa
2041 aaaa
//