LOCUS BC014392 606 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens S100 calcium binding protein A1, mRNA (cDNA clone
MGC:1324 IMAGE:3543900), complete cds.
ACCESSION BC014392
VERSION BC014392.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 606)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 606)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454031.
FEATURES Location/Qualifiers
source 1..606
/db_xref="H-InvDB:HIT000036670"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1324 IMAGE:3543900"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..606
/gene="S100A1"
/gene_synonym="S100"
/db_xref="GeneID:6271"
/db_xref="HGNC:HGNC:10486"
/db_xref="MIM:176940"
CDS 76..360
/gene="S100A1"
/gene_synonym="S100"
/codon_start=1
/product="S100 calcium binding protein A1"
/protein_id="AAH14392.1"
/db_xref="GeneID:6271"
/db_xref="HGNC:HGNC:10486"
/db_xref="MIM:176940"
/translation="MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSG
FLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWENS"
BASE COUNT 173 a 185 c 141 g 107 t
ORIGIN
1 gccacatttg caaccttggc catctgtcca gaacctgctc ccacctcagg cccaggccaa
61 ccgtgcactg ctgcaatggg ctctgagctg gagacggcga tggagaccct catcaacgtg
121 ttccacgccc actcgggcaa agagggggac aagtacaagc tgagcaagaa ggagctgaaa
181 gagctgctgc agacggagct ctctggcttc ctggatgccc agaaggatgt ggatgctgtg
241 gacaaggtga tgaaggagct agacgagaat ggagacgggg aggtggactt ccaggagtat
301 gtggtgcttg tggctgctct cacagtggcc tgtaacaatt tcttctggga gaacagttga
361 gcagacagcc acattgggca gcgcccttcc tctccaccct cccagacctg cctcttcccc
421 ctgcttccac ctcaccccac ttatccctct ccataacccc acccctgccc accccacccc
481 cacccccacc aagggcgcaa gagtagcggt ccaagcctgc aactcatctt tcattaaagg
541 cttctctctc accagccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaaaaa
//