LOCUS BC014387 1552 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens SH3-domain GRB2-like 1, mRNA (cDNA clone
IMAGE:3505990), partial cds.
ACCESSION BC014387
VERSION BC014387.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1552)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1552)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014387.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1552
/db_xref="H-InvDB:HIT000088388"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3505990"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1552
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/db_xref="GeneID:6455"
/db_xref="MIM:601768"
CDS <1..301
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/codon_start=2
/product="SH3GL1 protein"
/protein_id="AAH14387.1"
/db_xref="GeneID:6455"
/db_xref="MIM:601768"
/translation="QSNGGFPCTTAPKIAASSSFRSSDKPIRTPSRSMPPLDQPSCKA
LYDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDGQSGFFPLSYVEVLVPLPQ"
misc_feature 113..283
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/note="SH3; Region: Src homology 3 domains"
/db_xref="CDD:smart00326"
BASE COUNT 300 a 570 c 409 g 273 t
ORIGIN
1 gcagtccaac gggggcttcc cctgcaccac agcccccaag atcgcagctt catcgtcttt
61 ccgatcttcc gacaagccca tccggacccc tagccggagc atgccgcccc tggaccagcc
121 gagctgcaag gcgctgtacg acttcgagcc cgagaacgac ggggagctgg gcttccatga
181 gggcgacgtc atcacgctga ccaaccagat cgatgagaac tggtacgagg gcatgctgga
241 cggccagtcg ggcttcttcc cgctcagcta cgtggaggtg cttgtgcccc tgccgcagtg
301 actcacccgt gtccccgccc cgcccctccg tccacactgg ccggcacccc ctgctgggtc
361 tcctgcattc cacggagccc ctgctgccag ggcggtgtct gagcctgccg gcgccacctg
421 ggccccggcc cttgaggtac tccctgagca ggaccccaca cttgggtggg ggggcttatc
481 tgggtgggtg gggatgcctg tttacactag cgctgactcc caacggtgac ggctcccttc
541 cccactccat ggcgccagcc tcctcccccg ctccccaact tctcgcccag ctggccgagg
601 cggggcaaca ctaaggtgct cttagaaaca ctaatgttcc tctggggcag cccccacctc
661 cgtcctgacc cgacgggggc ccggcccact gcctaccctc gagtcccgca gccttaacag
721 gatgggatcg agggtcccca tggggtggct cagagatagg accctggttt taaatccctc
781 ccagcctggt gctggtgatg ggccctggcc ctactccagg gccaatgcac ccccgcctca
841 cacacgcact ccttctcctc aaggccaggg cagagggcct caccgcctcc cgggcctgct
901 gtcagcttgc agcccgggga cagaggccag ctgggatctg cctgaggaca gagaacatgg
961 tctcctgcag ggccctgcct cccaagcccc gccctcagaa agccaagtac cttttcagct
1021 ttttaactgc ccccatccca acccagggag gcctgtgtca ctctggcaca agctgccacc
1081 accagccacc cacacccacc ccagcacacc tcacacggga ccacagccgc gctgccgagg
1141 gccaagcaca aaggttccag tgagcgcatg tcccagcccc tggtggccag gctccccttg
1201 ctgagccgct gccacttcac cctgtgggaa gtggccccag ccatctcctc tagaccaagg
1261 caggcagccc cgacatctgc ttcctctatc gcccaatgca aaatcgatga aatggggagt
1321 tctctgggcc aggccacatt cacattcccc tccccctgtg gtccagtgaa gcctccggac
1381 cccaggctct gctctgccct gccctgcacc cccctcgtca gaagtacatg aggggcgcag
1441 agatgagcac acagctttgg gcacggtcca gggcaaactg aaatgtacgc ctgaattttg
1501 taaacagaag tattaaatgt ctctttctac aaaaaaaaaa aaaaaaaaaa aa
//