LOCUS BC014321 1212 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 4C, mRNA (cDNA clone
MGC:22825 IMAGE:3828410), complete cds.
ACCESSION BC014321
VERSION BC014321.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: d Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62526041.
FEATURES Location/Qualifiers
source 1..1212
/db_xref="H-InvDB:HIT000036640"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22825 IMAGE:3828410"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1212
/gene="CHMP4C"
/gene_synonym="MGC22825"
/gene_synonym="Shax3"
/db_xref="GeneID:92421"
/db_xref="HGNC:HGNC:30599"
CDS 179..880
/gene="CHMP4C"
/gene_synonym="MGC22825"
/gene_synonym="Shax3"
/codon_start=1
/product="chromatin modifying protein 4C"
/protein_id="AAH14321.1"
/db_xref="GeneID:92421"
/db_xref="HGNC:HGNC:30599"
/translation="MSKLGKFFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLE
NRIQREIALAKKHGTQNKRAALQALKRKKRFEKQLTQIDGTLSTIEFQREALENSHTN
TEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIAQEISEAFSQRVGFGDDFD
EDELMAELEELEQEELNKKMTNIRLPNVPSSSLPAQPNRKPGMSSTARRSRAASSQRA
EEEDDDIKQLAAWAT"
BASE COUNT 391 a 271 c 298 g 252 t
ORIGIN
1 ggggggaaat gccctggagt gtgtgtcacc tgtccaggac gacttgttga ttcccaggag
61 ggccgccttt ccggtctggg tccccgagag gactgccttg ctcacctgtc ccctcggcgc
121 ggccccgggg agctcccgag aggcccccgg gatcgctggc cctccgaact ccacagcaat
181 gagcaagttg ggcaagttct ttaaaggggg cggctcttct aagagccgag ccgctcccag
241 tccccaggag gccctggtcc gacttcggga gactgaggag atgctgggca agaaacaaga
301 gtacctggaa aatcgaatcc agagagaaat cgccctggcc aagaagcacg gcacgcagaa
361 taagcgagct gcattacagg cactaaagag aaagaagagg ttcgagaaac agctcactca
421 gattgatggc acactttcta ccattgagtt ccagagagaa gccctggaga actcacacac
481 caacactgag gtgttgagga acatgggctt tgcagcaaaa gcgatgaaat ctgttcatga
541 aaacatggat ctgaacaaaa tagatgattt gatgcaagag atcacagagc aacaggatat
601 cgcccaagaa atctcagaag cattttctca acgggttggc tttggtgatg actttgatga
661 ggatgagttg atggcagaac ttgaagaatt ggaacaggag gaattaaata agaagatgac
721 aaatatccgc cttccaaatg tgccttcctc ttctctccca gcacagccaa atagaaaacc
781 aggcatgtcg tccactgcac gtcgatcccg agcagcatct tcccagaggg cagaagaaga
841 ggatgatgat atcaaacaat tggcagcttg ggctacctaa actaaaacac atttttgata
901 cctaaattaa tgagctatag ataaaatata aaaaatgttt ttaccaagtt cagaagttaa
961 caaagactct gctttataat tatattgaat gaataattgt gttttaagcc tcctaagtaa
1021 aagtaaaaaa ggagtcatgt gcatacatag aatcagtgat ggaggccagg cacggtatct
1081 catgcctata atcccagcac tttgggaggc tgaggcagtt gagaccagga gttcgagtcc
1141 agcctgacca acatgaagaa accctgtctg tactaaaaat ccaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aa
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