LOCUS BC014307 746 bp mRNA linear HUM 20-MAY-2005
DEFINITION Homo sapiens chromosome 9 open reading frame 11, mRNA (cDNA clone
IMAGE:3935423), complete cds.
ACCESSION BC014307
VERSION BC014307.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 746)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 746)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..746
/db_xref="H-InvDB:HIT000036630"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3935423"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..746
/gene="C9orf11"
/db_xref="GeneID:54586"
CDS 85..468
/gene="C9orf11"
/codon_start=1
/product="C9orf11 protein"
/protein_id="AAH14307.1"
/db_xref="GeneID:54586"
/translation="MNFILFIFIPGVFSLKSSTLKPTIEALPNVLPLNEDVNKQEEKN
EDHTPNYAPANEKNGNYYKDIKQYVFTTQNPNGTESEISVRATTDLNFALKNDKTVNA
TTYEKSTIEEETTTSEPSHKNIQSI"
BASE COUNT 294 a 122 c 116 g 214 t
ORIGIN
1 gggagacaca ggacctgctg ggccacagaa aggaggctct gggtagacgc actagattac
61 tggataaatc acttcaattt cccaatgaat tttatattgt ttatttttat acctggagtt
121 ttttccttaa aaagtagcac tttgaagcct actattgaag cattgcctaa tgtgctacct
181 ttaaatgaag acgttaataa gcaggaagaa aagaatgaag atcatactcc caattatgct
241 cctgctaatg agaaaaatgg caattattat aaagatataa aacaatatgt gttcacaaca
301 caaaatccaa atggcactga gtctgaaata tctgtgagag ccacaactga cctgaatttt
361 gctctaaaaa acgataaaac tgtcaatgca actacatatg aaaaatccac cattgaagaa
421 gaaacaacta ctagcgaacc ctctcataaa aatattcaaa gtatttaaat tactacactg
481 tattcatacc tggagaatat cattatgtga cttaaaaatt taagtttcac tactctgagc
541 attacataaa gccatagcat gcttaaagaa tttatactgc taccttttaa agtcactaaa
601 atcttttaaa tggtgaatgt ctaagagtca gtcttcaggt atacctgaca aaggatgaga
661 aatgagcttt tgtagaaata gaactttatt ttaataaaaa tgtgttacat ttgtgtctaa
721 aaaaaaaaaa aaaaaaaaaa aaaaaa
//