LOCUS BC014276 2771 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens leucine-rich repeats and immunoglobulin-like domains
1, mRNA (cDNA clone IMAGE:3688299), partial cds.
ACCESSION BC014276
VERSION BC014276.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2771)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2771)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC014276.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: o Column: 15.
FEATURES Location/Qualifiers
source 1..2771
/db_xref="H-InvDB:HIT000088344"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3688299"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2771
/gene="LRIG1"
/gene_synonym="DKFZP586O1624"
/gene_synonym="LIG-1"
/gene_synonym="LIG1"
/db_xref="GeneID:26018"
CDS <1..1255
/gene="LRIG1"
/gene_synonym="DKFZP586O1624"
/gene_synonym="LIG-1"
/gene_synonym="LIG1"
/codon_start=2
/product="LRIG1 protein"
/protein_id="AAH14276.2"
/db_xref="GeneID:26018"
/translation="SAGSISANATLTVLETPSLVVPLEDRVVSVGETVALQCKATGNP
PPRITWFKGDRPLSLTERHHLTPDNQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQL
SVLPAAGCRKDGTTVGIFTIAVVSSIVLTSLVWVCIIYQTRKKSEEYSVTNTDETVVP
PDVPSYLSSQGTLSDRQETVVRTEGGPQANGHIESNGVCPRDASHFPEPDTHSVACRQ
PKLCAGSAYHKEPWKAMEKAEGTPGPHKMEHGGRVVCSDCNTEVDCYSRGQAFHPQPV
SRDSAQPSAPNGPEPGGSDQEHSPHHQCSRTAAGSCPECQGSLYPSNHDRMLTAVKKK
PMASLDGKGDSSWTLARLYHPDSTELQPASSLTSGSPERAEAQYLLVSNGHLPKACDA
SPESTPLTGQLPGKQRVPLLLAPKS"
misc_feature 56..307
/gene="LRIG1"
/gene_synonym="DKFZP586O1624"
/gene_synonym="LIG-1"
/gene_synonym="LIG1"
/note="IGcam; Region: Immunoglobulin domain cell adhesion
molecule (cam) subfamily"
/db_xref="CDD:cd00931"
BASE COUNT 759 a 629 c 698 g 685 t
ORIGIN
1 ctcagccggt tctatttcag ctaatgccac cctgactgtc ctagagaccc catccttggt
61 ggtccccttg gaagaccgtg tggtatctgt gggagaaaca gtggccctcc aatgcaaagc
121 cacggggaac cctccgcccc gcatcacctg gttcaagggg gaccgcccgc tgagcctcac
181 tgagcggcac cacttgaccc ctgacaacca gctcctggtg gttcagaacg tggtggcaga
241 ggatgcgggc cgatatacct gtgagatgtc caacaccctg ggcacggagc gagctcacag
301 ccagctgagc gtcctgcccg cagcaggctg caggaaggat gggaccacgg taggcatctt
361 caccattgct gtcgtgagca gcatcgtcct gacgtcactg gtctgggtgt gcatcatcta
421 ccagaccagg aagaagagtg aagagtacag tgtcaccaac acagatgaaa ccgtcgtgcc
481 accagatgtt ccaagctacc tctcttctca ggggaccctt tctgaccgac aagaaaccgt
541 ggtcaggacc gagggtggcc ctcaggccaa tgggcacatt gagagcaatg gtgtgtgtcc
601 aagagatgca agccactttc cagagcccga cactcacagc gttgcctgca ggcagccaaa
661 gctctgtgct gggtctgcgt atcacaaaga gccgtggaaa gcgatggaga aagctgaagg
721 gacacctggg ccacataaga tggaacacgg tggccgggtc gtatgcagtg actgcaacac
781 cgaagtggac tgttactcca ggggacaagc cttccacccc cagcctgtgt ccagagacag
841 cgcacagcca agtgcgccaa atggcccgga gccgggtggg agtgaccaag agcattctcc
901 acatcaccag tgcagcagga ctgccgctgg gtcctgcccc gagtgccaag ggtcgctcta
961 ccccagtaac cacgatagaa tgctgacggc tgtgaagaaa aagccaatgg catctctaga
1021 tgggaaaggg gattcttcct ggactttagc aaggttgtat cacccggact ccacagagct
1081 acagcctgca tcttcattaa cttcaggcag tccagagcgc gcggaagccc agtacttgct
1141 tgtttccaat ggccacctcc ccaaagcatg tgacgccagt cccgagtcca cgccactgac
1201 aggacagctc cccgggaaac agagggtgcc actgctgttg gcaccaaaaa gctaggtttt
1261 gtctacctca gttcttgtca taccaatctc tacgggaaag agaggtagga gaggctgcga
1321 ggaagcttgg gttcaagcgt cactcatctg tacatagttg taactcccat gtggagtatc
1381 agtcgctcac aggacttgga tctgaagcac agtaaacgca agaggggatt tgtgtacaaa
1441 aggcaaaaaa agtatttgat atcattgtac ataagagttt tcagagattt catatatatc
1501 ttttacagag gctattttaa tctttagtgc atggttaaca gaaaaaaatt atacaatttt
1561 gacaatatta tttttcgtat caggttgctg tttaattttg gagggggtgg ggaaatagtt
1621 ctggtgcctt aacgcatggc tggaatttat agaggctaca accacatttg ttcacaggag
1681 tttttggtgc ggggtgggaa ggatggaagg ccttggattt atattgcact tcatagaccc
1741 ctaggctgct gtgcggtggg actccacatg cgccggaagg agcttcaggt gagcactgct
1801 catgtgtgga tgcccctgca acaggcttcc ctgtctgtag agccaggggt gcaagtgcca
1861 tccacacttg cagtgaatgg cttttccttt taggtttaag tcctgtctgt ctgtaaggcg
1921 tagaatctgt ccgtctgtaa ggcgtagaat gagggttgtt aatccatcac aagcaaaagg
1981 tcagaacagt taaacactgc ctttcctcct cctcttattt tatgataaaa gcaaatgtgg
2041 ccttctcagt atcattcgat tgctatttga gacttttaaa ttaaggtaaa ggctgctggt
2101 gttggtacct gtggattttt ctatactgat gttttcgttt tgccaatata atgagtatta
2161 cattggcctt gggggacaga aaggaggaag ttctgacttt tcagggctac cttatttcta
2221 ctaaggaccc agagcaggcc tgtccatgcc attccttcgc acagatgaaa ctgagctggg
2281 actggaaagg acagcccttg acctgggttc tgggtataat ttgcactttt gagactggta
2341 gctaaccatc ttatgagtgc caatgtgtca tttagtaaaa cttaaataga aacaaggtcc
2401 ttcaaatgtt cctttggcca aaagctgaag ggagttactg agaaaatagt taacaattac
2461 tgtcaggtgt catcactgtt caaaaggtaa gcacatttag aattttgttc ttgacagtta
2521 actgactaat cttacttcca caaaatatgt gaatttgctg cttctgagag gcaatgtgaa
2581 agagggagta ttacttttat gtacaaagtt atttatttat agaaattttg gtacagtgta
2641 cattgaaaac catgtaaaat attgaagtgt ctaacaaatg gcattgaagt gtctttaata
2701 aaggttcatt tataaatgtc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa a
//