LOCUS BC014213 1619 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB30, member RAS oncogene family, mRNA (cDNA clone
MGC:20635 IMAGE:4763140), complete cds.
ACCESSION BC014213
VERSION BC014213.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1619)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1619)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014213.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147670.
FEATURES Location/Qualifiers
source 1..1619
/db_xref="H-InvDB:HIT000036580"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20635 IMAGE:4763140"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1619
/gene="RAB30"
/db_xref="GeneID:27314"
/db_xref="HGNC:HGNC:9770"
/db_xref="MIM:605693"
CDS 262..873
/gene="RAB30"
/codon_start=1
/product="RAB30, member RAS oncogene family"
/protein_id="AAH14213.1"
/db_xref="GeneID:27314"
/db_xref="HGNC:HGNC:9770"
/db_xref="MIM:605693"
/translation="MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGV
DFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPE
WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVE
KLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN"
BASE COUNT 465 a 355 c 390 g 409 t
ORIGIN
1 ctccagctga gctaagtgta gcagcagcac cagggcaggg actgactcca gcccttggac
61 tcaggacatc gcagaccttc ccttgcgtgc gtgactcatt cgcacatcca tttctgttta
121 tgcctggggt ggggagaaaa atcccaaacc agctccattg gatatgactg tgcactggag
181 ccggttgtgc tgttctctca gctgtacaca cccatcaaat cacagtgccc ctgaggacga
241 gagaaaattg aagctgtgta aatgagtatg gaagattatg atttcctgtt caaaattgtt
301 ttaattggca acgctggtgt ggggaagacg tgcctcgtcc gaagattcac tcagggtctt
361 ttccccccag gtcaaggagc cacaattgga gttgatttta tgattaagac agtggagatt
421 aatggtgaaa aagtaaagct acagatctgg gacacagcag gtcaagagag atttcggtcc
481 attacccaga gttactaccg aagcgccaat gccttgatcc tcacctatga cattacctgt
541 gaggaatcct tccgttgcct tcctgagtgg ctgcgggaga tagaacaata tgccagcaac
601 aaggtcatca ctgtgttagt gggcaacaag attgacctgg ctgaaaggag agaggtttcc
661 cagcagcgag ctgaagaatt ctcagaagct caggacatgt attatctgga gacctcagcc
721 aaggaatctg ataatgtgga gaaactcttc cttgacttag catgccgact catcagtgaa
781 gccagacaga acacacttgt gaacaatgta tcctcaccct tacctggaga agggaaaagc
841 atcagctatt tgacttgttg taatttcaac taaaggctga ggcacggaga agaaaaggaa
901 tcagcaactg ccctgatggg ccatgagatg ctggggagat ctggcgatga ctgtggctcc
961 cgctctctga ccttctgact cctgtgggct cctgagctta caaagcatgg caggccaagg
1021 gcctcgacca caggccagca ttagcagaac atataatggt ttcacccttt tccagtctgg
1081 agttggagca aggagaaaat tgcactaggc actccatgat ctgcagagca tgttgctttt
1141 gtttttttaa aaagcaagta aaagcgcatt cctaaacaga gtccgggggg aaatgtactg
1201 tagggatccc tcctgcacat cagtgggtgc atgtgggaac tcttctttag ggcttcggtg
1261 gtaatcatct gggggccctg gttttcttgt ctaccagata aaccaaaact gggaaggcca
1321 agtacagtct ctgtggtgcg tattgacgac cccatggaga ttttgaaaag tgttatttct
1381 cttgtccaca ggcactttca agaactttgg gatgtaaaaa tgaaatgaaa cctttaccca
1441 tgaccaacag taacaatcat tgttttaata atatatacaa gctccataac tccttttggt
1501 gctaatgatt ccgctatttc acagaccaaa cgttttagta cattaatgtc cttaaatgtg
1561 ttatatagaa ataaaaaaat gggggaagtc catgaatcag caaaaaaaaa aaaaaaaaa
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